Parental gene:

MDH2, ENSMODG00000013680

Aliases:None
Description:Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F6QQ58]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:529228081..529243733(-)


>ENSMODG00000013680
ATGCTGTCCTCCTTTGCCCGTCCCGCTGGCGCCGCCCTCCGCCGCAGCCTGAGTACATCTGCGCAGAATAATGCAAAAGT
AGCTGTACTAGGTGCTTCTGGAGGAATTGGACAGCCTCTCTCACTGCTCCTGAAGAATAGCCCTTTGGTGAGCCGTCTCA
CACTCTATGACATTGCTCATACCCCTGGAGTAGGAGCTGATTTGAGCCACATTGAGACCAGAGCAAAGGTGAAAGGTTAC
ATGGGACCCGAGCAACTGCCAGATTGCTTGAAAGGCTGTGATGTTGTTGTGATTCCTGCAGGAGTCCCTAGAAAGCCAGG
AATGACTCGTGATGACCTTTTCAACACTAATGCTACAATCGTTGCCACTTTGGCTACTGCTTGTGCCAAGCATTGCCCGG
AAGCCGCAATCTGTATTATTGCAAACCCGGTCAACTCTACCATCCCAATCACATCTGAAGTATTTAAGAAACAAGGTGTG
TACAACCCCAACAAAATCTTTGGTGTAACAACACTGGATATCGTCAGAGCAAATACCTTTGTGGCGGAACTGAAGGGCCT
AGATCCAGCTCGGGTCAATGTCCCTGTCATTGGTGGCCATGCAGGGAAGACTATTATCCCTCTGATCTCTCAGTGCACAC
CCAAAGTAGAATTTCCTGAGGATCAGCTGACAACCCTGACAGGAAGGATCCAGGAGGCTGGAACAGAGGTTGTCAAAGCT
AAAGCTGGGGCAGGTTCTGCTACCCTATCAATGGCCTATGCTGGAGCCAGGTTCGTCTTCTCTGTTGTGGATGCAATGAA
TGGAAAGGAGGGAGTCGTGGAATGCTCCTTTGTCAGATCAGAAGAGACAGAGTGCTCCTATTTTTCCACACCCTTGTTGC
TTGGGAAAAAGGGCATCGAGAAGAACTTGGGCATTGGCAAGGTCTCCCCTTTTGAAGAGAAGATGATTGCTGAAGCCATT
CCTGAGCTGAAAGCTTCCATCAAGAAAGGAGAAGATTTTGTCAAGAATATGAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010846 ortholog_one2many 1 retrogene
retro_amel_361,
Canis familiaris ENSCAFG00000013515 ortholog_one2many 2 retrogenes
retro_cfam_182, retro_cfam_41,
Myotis lucifugus ENSMLUG00000017795 ortholog_one2one 1 retrogene
retro_mluc_1948,
Mustela putorius furo ENSMPUG00000016000 ortholog_one2one 2 retrogenes
retro_mputfur_1607, retro_mputfur_478,
Mus musculus ENSMUSG00000019179 ortholog_one2one 1 retrogene
retro_mmus_2451,
Otolemur garnettii ENSOGAG00000009705 ortholog_one2one 1 retrogene
retro_ogar_3068,
Pteropus vampyrus ENSPVAG00000003397 ortholog_one2one 1 retrogene
retro_pvam_981,
Tupaia belangeri ENSTBEG00000003190 ortholog_one2one 1 retrogene
retro_tbel_440,
Tursiops truncatus ENSTTRG00000014834 ortholog_one2one 1 retrogene
retro_ttru_1550,
Drosophila melanogaster FBgn0262559 ortholog_one2many 2 retrogenes
retro_dmel_54, retro_dmel_76,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1711 88.37 50.59
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Download FASTA sequences of all ENSMODG00000013680 retrocopies