Parental gene:

TAF1D, ENSMODG00000008546

Aliases:None
Description:TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa [Source:HGNC Symbol;Acc:28759]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:265451200..265457974(+)


>ENSMODG00000008546
ATGTCTTCTGATCCCATTTTACCTTTGGCTTCAACTAGTTCATTAGTAAACAATGAAAGTGATGACTCGGATTCTAGCAA
CAGTTTATTCAAAACTCAGTGTGATCCCATCTCACCCAGTCGAGAACCTAGAAACATATCTACCTGTAATACAATTCATT
TACCTCCAAATACTTGGTTGAGAGATTATTCAAGTGACTCCTCTTCAGAACTAGAACCATTTAATTTGAAAGTTGTTTTT
GAAAATTGGAAGAAAAAGAAAAGGAAAATACAAAAAAAGAAAAGAAAATACAAGCCATCTGGAAGGCCAAAGGGAAGGCC
AAAAGGAAGCACTAAAACAACTCAATCTTTAGCCGTTATGTCGAAAAAGGACCTTTTCAAAGATAAAGGTTTACAGTTCC
CTTTGGTAGAATCAGAGAATGGAAGAAAACCATTACTTTGGAAGAAAATTTTAGGCTTTGAGCAAGCAGTTGCAAGAGGG
TTTTTCAACTATGTTAAGGAACAGAAATATGAATCCCACCTCAGAGAGGCTTTGAAGCATCTGGGTGCTAGTGAAGATTT
AGACAAAGAAGACTTTGGTGTACGGAGATATAAATATTTAGAAGATGATGATGAATCTATTTCTCCTATAGAAGATTCCA
ATGCAGAATACAACCAGTTGGATGATCAAGATGACTGTGATGTCAAATTAGTGGACAATAGTTGTTTCATAATAAGTACT
GAATTGCCCGAGAAGACAAAGTCAAAGATGAAAAAGACTGCTAAAGACTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013436 ortholog_one2one 1 retrogene
retro_chof_405,
Myotis lucifugus ENSMLUG00000011431 ortholog_one2many 1 retrogene
retro_mluc_2033,
Oryctolagus cuniculus ENSOCUG00000001096 ortholog_one2many 2 retrogenes
retro_ocun_101, retro_ocun_23,
Otolemur garnettii ENSOGAG00000002521 ortholog_one2many 1 retrogene
retro_ogar_1139,
Sarcophilus harrisii ENSSHAG00000005874 ortholog_one2one 1 retrogene
retro_shar_566,
Tarsius syrichta ENSTSYG00000014258 ortholog_one2one 1 retrogene
retro_tsyr_1107,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1216 84.81 61.72
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Download FASTA sequences of all ENSMODG00000008546 retrocopies