Parental gene:

FKBP3, ENSMODG00000007352

Aliases:None
Description:FK506 binding protein 3, 25kDa [Source:HGNC Symbol;Acc:3719]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:255613096..255624192(+)


>ENSMODG00000007352
ATGGCGGCTGCAGGGCCACAGCGGACATGGAGTGCTGAGCAGCTGCGTAGCGAGGCACTCCCCAAGAAGGATATCATCAA
GTTTTTGCAGGACAACGGCTCGGATTCGTTTCTTGCAGAACATAAATTACTTGGAAACATAAAAAATGTGGCCAAGACAG
CAAACAAGGATCATTTAGTCACAGCCTACAACCACCTTTTTGAAAGTAAGCGTTTCAAAGGTACTGAGAGTGTTGCCAAA
GTGACAGAGCAAGTGAAAAGTGTGAAGCTTGATGAAGAGAAATCCAAAGAAGTCAAACCTGAAGAGACTTTAGATGAGGG
GCCACCAAAATATACAAAATCTATTCTTAAGAAGGGAGATAAAACTAACTTTCCCAAAAAAGGAGATGTTGTTCATTGCT
GGTACACTGGAACTTTACAGGATGGAACTGTTTTTGATACTAATATTCAAACTAGTGCAAAGAAGAAAAAGAATGCTAAG
CCTCTAAGTTTTAAAGTTGGAGTGGGTAAAGTTATCAGAGGATGGGATGAAGCACTCTTAACAATGAGTAAAGGAGAAAA
GGCTCGCCTGGAGATTGAGCCTGAATGGGCTTATGGCAAGAAAGGACAACCTGATGCAAAAATTCCACCAAACGCAAAAC
TCAATTTTGAAGTGGAATTAGTAGACATCGATTGA

Library Parental gene expression (RPM)
SRP007412_brain 28 .96 RPM
SRP007412_cerebellum 17 .30 RPM
SRP007412_heart 46 .65 RPM
SRP007412_kidney 23 .70 RPM
SRP007412_liver 30 .71 RPM
SRP007412_testis 27 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000014018 ortholog_one2many 4 retrogenes
retro_cfam_1788, retro_cfam_440, retro_cfam_616, retro_cfam_798,
Choloepus hoffmanni ENSCHOG00000000189 ortholog_one2one 1 retrogene
retro_chof_2315,
Dipodomys ordii ENSDORG00000009462 ortholog_one2one 1 retrogene
retro_dord_106,
Equus caballus ENSECAG00000018299 ortholog_one2one 2 retrogenes
retro_ecab_352, retro_ecab_565,
Echinops telfairi ENSETEG00000003358 ortholog_one2one 8 retrogenes
retro_etel_1114, retro_etel_1484, retro_etel_1491, retro_etel_1499, retro_etel_1774, retro_etel_2130, retro_etel_2200, retro_etel_997,
Felis catus ENSFCAG00000027304 ortholog_one2one 1 retrogene
retro_fcat_1894,
Loxodonta africana ENSLAFG00000003572 ortholog_one2many 2 retrogenes
retro_lafr_357, retro_lafr_76,
Macropus eugenii ENSMEUG00000004962 ortholog_one2one 1 retrogene
retro_meug_679,
Microcebus murinus ENSMICG00000005808 ortholog_one2one 2 retrogenes
retro_mmur_1582, retro_mmur_351,
Macaca mulatta ENSMMUG00000016512 ortholog_one2one 2 retrogenes
retro_mmul_2094, retro_mmul_735,
Monodelphis domestica ENSMODG00000019554 other_paralog 2 retrogenes
retro_mdom_151, retro_mdom_733,
Mus musculus ENSMUSG00000020949 ortholog_one2one 1 retrogene
retro_mmus_1322,
Otolemur garnettii ENSOGAG00000003012 ortholog_one2many 2 retrogenes
retro_ogar_2247, retro_ogar_3472,
Ochotona princeps ENSOPRG00000011126 ortholog_one2one 2 retrogenes
retro_opri_204, retro_opri_600,
Procavia capensis ENSPCAG00000011316 ortholog_one2one 2 retrogenes
retro_pcap_454, retro_pcap_78,
Rattus norvegicus ENSRNOG00000004629 ortholog_one2one 1 retrogene
retro_rnor_1165,
Ictidomys tridecemlineatus ENSSTOG00000002249 ortholog_one2one 1 retrogene
retro_itri_650,
Tupaia belangeri ENSTBEG00000006017 ortholog_one2one 13 retrogenes
retro_tbel_1032, retro_tbel_1125, retro_tbel_1696, retro_tbel_1783, retro_tbel_2151, retro_tbel_2569, retro_tbel_3297, retro_tbel_3567, retro_tbel_3807, retro_tbel_4222, retro_tbel_4482, retro_tbel_730, retro_tbel_800,
Tarsius syrichta ENSTSYG00000002125 ortholog_one2one 2 retrogenes
retro_tsyr_515, retro_tsyr_820,
Tursiops truncatus ENSTTRG00000006664 ortholog_one2one 1 retrogene
retro_ttru_1041,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1554 96.89 100.00
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Download FASTA sequences of all ENSMODG00000007352 retrocopies