Parental gene:

MMADHC, ENSMODG00000003566

Aliases:None
Description:methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:HGNC Symbol;Acc:25221]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:151468669..151497554(-)


>ENSMODG00000003566
ATGGCCAATGTGCTCTGTAGCAGAGCCAGGCTGGTTACCTACCTCCCAGGCTTTTACTCTTTAGTCAGGAGGGTTGTAAA
TCCCAAAGCTTTTTCTACTGCTGGATCTTCAGGTTCAGATGAGTCTCATGTAGCTACTACACCCCCAGACATATGTTCAA
GGACTGTGTGGCCAGATGAAACAATGGGACCGTTTGGACCCCAGGATCAAAGATTTCAGCTCCCTGGAAATATAGGTTTT
GATTGTCACCTCAATGGGACAGCTTTGCAGAAGAAAAATCCAGTTCATAGAACTTTGCCTGATGTCTTAGCAGAGCCTTT
ATCAAGTGAAAGGCATGAATTTGTGATGGCACAATATGTAAATGAATTTGAGGGAAGTGATGTACCTGTTGAACAACAGG
AAGTTAACAAAGCAGAAACTTATTTTGAAAATGCCAAAGTAGAATGTGTACTCCAGACATGCCCAGAACTACTTCGAAAA
GATTTTGAATCAATATTTCCAGAAGTGAATTCGGGCAAACTAATGGTACTAACTGTAACACAGAAAACCAAAAATGATAT
GACCACATGGAGTGAGGAGGTTGAAAATGAAAGAGAAATGCTGTTAGAAAAGTTCATAACTGGTGCTAAAGAAATTTGCT
ATGCTTTGCGTACTGAAGGCTATTGGGCTGACTTTATTGATCCATCATCTGGATTGGCATTTTTTGGACCATATACAAGC
AATACTCTTTTTGAAACAGATGAGCGATATCGACATTTAGGATTCTCTGTTGATGATCTTGGCTGCTGCAAAGTGATTCG
CCATAGTATTTGGGGTACACATGTGGTTGTTGGAAGTATCTTCACTAATGCCACACCTGACAGTAGAATTATGAAGAAAT
TAAGTGGAAACTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003086 ortholog_one2one 2 retrogenes
retro_cjac_4082, retro_cjac_4101,
Cavia porcellus ENSCPOG00000007690 ortholog_one2many 1 retrogene
retro_cpor_30,
Homo sapiens ENSG00000168288 ortholog_one2one 2 retrogenes
retro_hsap_4716, retro_hsap_865,
Gorilla gorilla ENSGGOG00000027348 ortholog_one2one 1 retrogene
retro_ggor_704,
Macaca mulatta ENSMMUG00000005633 ortholog_one2one 1 retrogene
retro_mmul_1058,
Mustela putorius furo ENSMPUG00000000323 ortholog_one2one 1 retrogene
retro_mputfur_1253,
Nomascus leucogenys ENSNLEG00000010795 ortholog_one2one 2 retrogenes
retro_nleu_1988, retro_nleu_426,
Otolemur garnettii ENSOGAG00000034385 ortholog_one2one 4 retrogenes
retro_ogar_3266, retro_ogar_356, retro_ogar_688, retro_ogar_813,
Pan troglodytes ENSPTRG00000012525 ortholog_one2one 1 retrogene
retro_ptro_599,
Ictidomys tridecemlineatus ENSSTOG00000021576 ortholog_one2one 1 retrogene
retro_itri_1809,
Tarsius syrichta ENSTSYG00000009075 ortholog_one2one 1 retrogene
retro_tsyr_1690,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_620 83.72 100.00
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2. retro_mdom_1749 63.35 83.50
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Download FASTA sequences of all ENSMODG00000003566 retrocopies