Parental gene:

MMU.3696, ENSMMUG00000017461

Aliases:None
Description:partner of NOB1 [Source:RefSeq peptide;Acc:NP_001165579]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:68425126..68443425(+)


>ENSMMUG00000017461
ATGGAATCCGAAATGGAAGCGCAGAGCGCCGGGGCAGAGGAGGGCTTTACCCAGGTCACCCGTAAGGGTGGCCGGCGGGC
GAAGAAACGACAGGCTGAACAGCTGTCCGCAGCGGGAGAGGGCGGGGATGCGGGCCGGATGGACACAGAGGAGGCCAGGC
CGGCGAAGAGGCCCGTCTTCCCACCCCTCTGTGGGGACGGGCTCCTGAGTGGAAAAGAAGAAACAAGGAAAATTCCAGTC
CCAGCTAACAGATACACACCGTTGAAAGAAAACTGGATGAAGATATTTACTCCTATTGTGGAACATTTGGGACTTCAGAT
ACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGACTTGTAAAGAAACCAAAGATGTTAGTGCTCTGACAAAAGCAG
CTGATTTTGTGAAAGCTTTTATTCTAGGCTTTCAGGTGGAGGATGCACTTGCCCTCATCAGGTTGGATGACCTCTTCCTA
GAGTCTTTTGAAATTACAGATGTTAAACCCCTAAAGGGAGACCATCTATCCAGGGCAATAGGAAGAATCGCTGGCAAAGG
AGGAAAAACCAAATTCACCATAGAGAATGTGACACGGACGCGGATAGTTTTGGCTGATGTGAAAGTTCACATCCTTGGCT
CCTTCCAAAACATCAAGATGGCAAGAACTGCCATTTGCAACCTAATCTTGGGAAATCCTCCTTCCAAGGTTTATGGCAAT
ATTCGAGCTGTGGCTAGCAGATCAGCAGATCGATTCTGA

Library Parental gene expression (RPM)
SRP007412_brain 6 .72 RPM
SRP007412_brain_prefrontal_cortex 7 .06 RPM
SRP007412_cerebellum 7 .62 RPM
SRP007412_heart 5 .95 RPM
SRP007412_kidney 8 .92 RPM
SRP007412_liver 4 .59 RPM
SRP007412_testis 5 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003256 ortholog_one2many 1 retrogene
retro_cfam_1886,
Callithrix jacchus ENSCJAG00000006564 ortholog_many2many 3 retrogenes
retro_cjac_2615, retro_cjac_273, retro_cjac_4127,
Felis catus ENSFCAG00000025330 ortholog_one2many 2 retrogenes
retro_fcat_1521, retro_fcat_864,
Loxodonta africana ENSLAFG00000000046 ortholog_one2many 1 retrogene
retro_lafr_419,
Microcebus murinus ENSMICG00000010897 ortholog_one2many 1 retrogene
retro_mmur_516,
Myotis lucifugus ENSMLUG00000010850 ortholog_one2many 1 retrogene
retro_mluc_1719,
Nomascus leucogenys ENSNLEG00000009993 ortholog_one2many 1 retrogene
retro_nleu_2389,
Oryctolagus cuniculus ENSOCUG00000006100 ortholog_many2many 1 retrogene
retro_ocun_47,
Otolemur garnettii ENSOGAG00000016637 ortholog_one2many 1 retrogene
retro_ogar_3025,
Pongo abelii ENSPPYG00000012353 ortholog_one2many 1 retrogene
retro_pabe_1232,
Rattus norvegicus ENSRNOG00000005524 ortholog_one2many 1 retrogene
retro_rnor_712,
Sus scrofa ENSSSCG00000008352 ortholog_one2many 2 retrogenes
retro_sscr_114, retro_sscr_352,
Tarsius syrichta ENSTSYG00000004007 ortholog_one2many 1 retrogene
retro_tsyr_1625,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_102 98.02 100.00
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2. retro_mmul_352 94.87 77.38
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Download FASTA sequences of all ENSMMUG00000017461 retrocopies