Parental gene:

AP4S1, ENSMMUG00000003123

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:94018622..94036396(+)


>ENSMMUG00000003123
ATGATAAAATTTTTCCTCATGGTGAATAAACAAGGGCAGACTCGACTTTCTAAGTACTATGAACATGTGGATATTAATAA
GCGTACACTTCTGGAAACAGAAGTTATAAAGAGCTGTCTCTCTCGGTCCAATGAACAATGCTCTTTCATTGAATATAAGG
ATTTTAAGCTGATATATCGGCAGTATGCAGCTCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAATTATGCGTCTCTT
GATTTTTTTTTTTTTTTTTTTGACGGAGTCTTGCCCTGTTGCCAGGCTGTAGTACATGAATTAGACGTATCCTTTTTCAA
TACTGTTTTCCACGGTACTTGGCAAGCGCACTCTAGTCCTTATCAGGTAAGCTCTTGCTCTGTCACCCAGGCTGGAGTGC
AGAGGTGTGATCATGGCTCACTACACCCTGGATCTCCTGGGCTCAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 2 .58 RPM
SRP007412_brain_prefrontal_cortex 1 .67 RPM
SRP007412_cerebellum 2 .20 RPM
SRP007412_heart 0 .82 RPM
SRP007412_kidney 0 .94 RPM
SRP007412_liver 0 .20 RPM
SRP007412_testis 0 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013301 ortholog_one2one 4 retrogenes
retro_chof_2345, retro_chof_2677, retro_chof_393, retro_chof_820,
Callithrix jacchus ENSCJAG00000005786 possible_ortholog 1 retrogene
retro_cjac_2742,
Dipodomys ordii ENSDORG00000009468 ortholog_one2one 1 retrogene
retro_dord_595,
Erinaceus europaeus ENSEEUG00000013009 ortholog_one2one 1 retrogene
retro_eeur_301,
Myotis lucifugus ENSMLUG00000011671 possible_ortholog 1 retrogene
retro_mluc_1841,
Macaca mulatta ENSMMUG00000014055 within_species_paralog 1 retrogene
retro_mmul_1716,
Monodelphis domestica ENSMODG00000017579 ortholog_one2many 1 retrogene
retro_mdom_1774,
Ornithorhynchus anatinus ENSOANG00000014031 ortholog_one2many 1 retrogene
retro_oana_60,
Pongo abelii ENSPPYG00000005723 possible_ortholog 1 retrogene
retro_pabe_2889,
Pteropus vampyrus ENSPVAG00000017161 ortholog_one2one 1 retrogene
retro_pvam_1455,
Rattus norvegicus ENSRNOG00000005765 possible_ortholog 1 retrogene
retro_rnor_2200,
Ictidomys tridecemlineatus ENSSTOG00000010759 ortholog_one2one 1 retrogene
retro_itri_1050,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_17 73.33 70.47
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Download FASTA sequences of all ENSMMUG00000003123 retrocopies