Parental gene:

MMU.18841, ENSMMUG00000001544

Aliases:None
Description:leucine-rich repeat-containing protein 57 [Source:RefSeq peptide;Acc:NP_001181816]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:20977732..20983347(-)


>ENSMMUG00000001544
ATGGGAAACAGTGCGCTCCGCGCTCATGTGGAAACGGCGCAGAAAACTGGTGTCTTTCAGCTTAAGGACCGAGGGCTGAC
CGAGTTCCCCGCAGACTTGCAGAAGCTCACGAGCAATCTCAGGACCATCGACTTGTCCAACAACAAGATCGAGAGCCTAC
CGCCTTTGCTGATAGGAAAGTTCACTCTGCTGAAGAGCCTCTCCCTGAACAACAACAAACTGACTGTTCTGCCTGATGAG
ATATGCAATCTGAAAAAACTAGAGACGCTAAGCCTGAACAACAATCACCTTAGAGAGCTGCCGTCTACCTTTGGGCAACT
CTCTGCCCTCAAGACCCTGAGCCTCTCTGGGAACCAACTGGGAGCATTACCTCTCCAACTTTGTAGCCTGCGGCATCTGG
ATGTGGTGGATCTCTCTAAGAACCAGATTCGAAGTATACCTGACACAGTGGGAGAGCTGCAAGTCATCGAACTCAACCTC
AACCAGAATCAGATATCTCAGATCTCAGTGAAGATATCTTGCTGTCCTCGCCTTAAAATTCTTCGCCTGGAAGAGAATTG
TCTTGAGCTCAGCATGCTTCCCCAGAGCATCCTCAGTGATTCCCAGATCTGTCTGCTTGCTGTGGAAGGCAATCTTTTTG
AAATAAAGAAACTTCGAGAACTGGAAGGCTATGATAAGTACATGGAGAGGTTCACAGCCACCAAGAAGAAGTTTGCGTGA

Library Parental gene expression (RPM)
SRP007412_brain 13 .33 RPM
SRP007412_brain_prefrontal_cortex 14 .20 RPM
SRP007412_cerebellum 6 .46 RPM
SRP007412_heart 3 .30 RPM
SRP007412_kidney 9 .86 RPM
SRP007412_liver 1 .66 RPM
SRP007412_testis 57 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006482 ortholog_one2one 1 retrogene
retro_chof_2306,
Callithrix jacchus ENSCJAG00000002991 ortholog_one2one 1 retrogene
retro_cjac_2819,
Homo sapiens ENSG00000180979 ortholog_one2one 1 retrogene
retro_hsap_2163,
Gorilla gorilla ENSGGOG00000009597 ortholog_one2one 1 retrogene
retro_ggor_1718,
Loxodonta africana ENSLAFG00000005465 ortholog_one2one 2 retrogenes
retro_lafr_1027, retro_lafr_767,
Macaca mulatta ENSMMUG00000016067 other_paralog 1 retrogene
retro_mmul_712,
Nomascus leucogenys ENSNLEG00000004485 ortholog_one2one 1 retrogene
retro_nleu_1812,
Otolemur garnettii ENSOGAG00000007751 ortholog_one2one 1 retrogene
retro_ogar_3437,
Pan troglodytes ENSPTRG00000006976 ortholog_one2one 2 retrogenes
retro_ptro_1649, retro_ptro_1650,
Rattus norvegicus ENSRNOG00000009143 ortholog_one2many 1 retrogene
retro_rnor_796,
Rattus norvegicus ENSRNOG00000048310 ortholog_one2many 1 retrogene
retro_rnor_1732,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_901 67.92 98.74
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Download FASTA sequences of all ENSMMUG00000001544 retrocopies