Parental gene:

PSMD12, ENSLAFG00000010876

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_49:16284496..16306778(-)


>ENSLAFG00000010876
ATGGCGGACGGCGGCTCAGAGCGGGCTGATGGGCGCATCGTCAAGATGGAGGTGGACTACAGCGCCACCGTGGATCAGCG
CCTGCCGGAGTGCGAGAAGCTGGCCAAGGAAGGAAGACTTCAAGAAGTCATTGAAACCCTTCTCTCTTTGGAAAAACAGA
CCCGTACAGCTTCTGATATGGTGTCTACTTCCCGTATCTTAGTTGCAGTCGTGAAGATGTGCTATGAGGCTAAAGAATGG
GATTTACTAAATGAAAATATTATGCTTTTGTCAAAAAGACGGAGTCAGTTAAAACAAGCTGTTGCAAAAATGGTTCAACA
GTGCTGTACGTATGTTGACGAAATCACAGACCTTCCAATCAAACTTCGATTAATTGATACTCTACGAATGGTTACAGAAG
GAAAGATTTATGTTGAAATTGAGCGTGCTCGACTGACTAAAACATTAGCAACAATAAAAGAACAAAATGGTGACGTGAAG
GAGGCAGCCTCCATTTTACAGGAGTTACAGGTGGAAACCTATGGATCAATGGAAAAGAAAGAGCGAGTGGAGTTTATTTT
GGAGCAAATGAGGCTCTGCCTAGCTGTGAAGGATTACATTCGTACACAAATCATCAGCAAGAAAATTAATACCAAATTTT
TCCAGGAAGAAAACACAGAGAAATTAAAGTTGAAATATTATAACTTAATGATTCAGCTGGATCAACATGAGGGATCCTAT
TTGTCCATTTGTAAGCACTACAGAGCAATATATGACACTCCCTGTATACAGGCAGAAAGTGAGAAGTGGCAGCAGGCTCT
GAAAAGTGTTGTTCTTTATGTTATCCTGGCTCCTTTTGACAATGAACAGTCAGATTTGGTTCACCGAATAAGCGGTGACA
AGAAATTAGAAGAAATTCCCAAATACAAGGATCTTTTAAAGCTTTTTACCACAATGGAGTTGATGCGTTGGTCCACACTC
GTTGAGGACTATGGAATGGAATTAAGAAAAGGTTCTCGTGAGAGTCCAGCAACTGATGTTTTTGGCTCTACAGAGGAAGG
TGAAAAAAGGTGGAAAGACTTAAAGAACAGAGTTGTTGAACATAATATTAGAATAATGGCCAAATATTATACGAGGATAA
CAATGAAGAGGATGGCACAGCTTCTGGATCTGTCCGTCGATGAGTCAGAGGCTTTTCTCTCAAATCTAGTTGTTAACAAG
ACCATCTTTGCTAAAGTAGACAGGTTGGCAGGAATTATCAACTTCCAGAGACCCAAGGATCCAAATAATTTATTAAATGA
CTGGTCTCAGAAACTGAACTCATTGATGTCTCTAGTTAACAAAACCACACACCTCATAGCCAAAGAGGAGATGATACATA
ATCTACAATAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008691 ortholog_one2one 2 retrogenes
retro_cjac_1400, retro_cjac_2793,
Homo sapiens ENSG00000197170 ortholog_one2one 1 retrogene
retro_hsap_2801,
Gorilla gorilla ENSGGOG00000014761 ortholog_one2one 1 retrogene
retro_ggor_1947,
Nomascus leucogenys ENSNLEG00000001265 ortholog_one2one 1 retrogene
retro_nleu_1541,
Pongo abelii ENSPPYG00000008565 ortholog_one2one 1 retrogene
retro_pabe_2223,
Pan troglodytes ENSPTRG00000022722 ortholog_one2one 1 retrogene
retro_ptro_1898,
Tupaia belangeri ENSTBEG00000014760 ortholog_one2one 1 retrogene
retro_tbel_443,
Tarsius syrichta ENSTSYG00000013154 ortholog_one2one 1 retrogene
retro_tsyr_1670,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_467 81.43 51.54
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Download FASTA sequences of all ENSLAFG00000010876 retrocopies