Parental gene:

PERP, ENSGGOG00000028340

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:6:138853842..138873016(-)


>ENSGGOG00000028340
ATGATCCGCTGCGGCCTGGCCTGCGAGCGCTGCCGCTGGATCCTGCCCCTGCTCCTACTCAGCGCCATCGCCTTCGACAT
CATCGCGCTGGCCGGCCGCGGCTGGTTGCAATCTAGCGACCACATCCAGACGTCCTCGCTGTGGTGGAAATGCTCCCAAG
AGGGCGGCGGCAGCGGGTCCTACGAGGAGGGCTGCCAGAGCCTCATGGAGTACGCATGGGGTAGAGCAGCGGCTGCCATG
CTCTTCTGTGGCTTCATCATCCTGGTGATCTGTTTCATCCTCTCCTTCTTCGCCCTCTGTGGACCCCAGATGCTTGTCTT
CCTGAGAGTGATTGGAGGTCTCCTTGCCTTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCCGTGAAGTACA
CCCAGACCTTCGCCCTTCATGCCAACCCCGCTGTCACTTACATCTATAACTGGGCCTACGGCTTTGGGTGGGCAGCCACG
ATTATCCTGATCGGCTGTGCCTTCTTCTTCTGCTGCCTCCCCAACTACGAAGATGACCTTCTGGGCAATGCCAAGCCCAG
GTACTTCTACACATCTGCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .49 RPM
SRP007412_cerebellum 3 .35 RPM
SRP007412_heart 13 .76 RPM
SRP007412_kidney 18 .11 RPM
SRP007412_liver 52 .07 RPM
SRP007412_testis 4 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020097 ortholog_many2many 1 retrogene
retro_btau_165,
Callithrix jacchus ENSCJAG00000019024 ortholog_one2one 1 retrogene
retro_cjac_3992,
Homo sapiens ENSG00000112378 ortholog_one2one 2 retrogenes
retro_hsap_1523, retro_hsap_2901,
Macropus eugenii ENSMEUG00000004872 ortholog_one2many 1 retrogene
retro_meug_845,
Microcebus murinus ENSMICG00000013979 ortholog_one2many 1 retrogene
retro_mmur_353,
Myotis lucifugus ENSMLUG00000001473 ortholog_one2many 1 retrogene
retro_mluc_2287,
Macaca mulatta ENSMMUG00000000997 ortholog_one2one 1 retrogene
retro_mmul_2156,
Nomascus leucogenys ENSNLEG00000014930 ortholog_one2one 2 retrogenes
retro_nleu_1934, retro_nleu_631,
Oryctolagus cuniculus ENSOCUG00000004238 ortholog_many2many 1 retrogene
retro_ocun_170,
Otolemur garnettii ENSOGAG00000011669 ortholog_one2many 1 retrogene
retro_ogar_631,
Pongo abelii ENSPPYG00000017043 ortholog_one2one 3 retrogenes
retro_pabe_1267, retro_pabe_2400, retro_pabe_2416,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1165 86.52 71.50
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Download FASTA sequences of all ENSGGOG00000028340 retrocopies