Parental gene:

RNF4, ENSGGOG00000015149

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:4:2484743..2531236(+)


>ENSGGOG00000015149
ATGAGTACAAGAAAGCGTCGTGGTGGAGCAATAAATTCTAGACAAGCCCAGAAGCGAACTCGGGAAGCAACCTCCACCCC
CGAGATTTCCTTGGAAGCAGAACCCATAGAACTCGTGGAAACTGCTGGAGATGAAATTGTGGACCTCACTTGTGAATCTT
TAGAGCCTGTGGTGGTTGATCTCACTCACAATGACTCTGTTGTGATTGTTGACGAAAGAAGAAGACCAAGGAGGAATGCT
AGGAGGCTGCCCCAGGACCATGCTGACAGCTGTGTGGTGAGCAGTGACGATGAGGAGTTGTCCAGGGACAGAGACGTGTA
TGTGACTACCCATACTCCCAGAAACGCCAGGGATGAGGGCGCTACAGGCCTCAGGCCCTCGGGTACTGTCAGTTGTCCCA
TCTGCATGGACGGATACTCAGAGATTGTGCAGAATGGACGTCTCATCGTTTCCACAGAATGCGGCCATGTCTTCTGTAGC
CAGTGCCTCCGTGATTCCCTGAAGAATGCTAATACTTGCCCAACTTGTAGGAAAAAGATCAACCACAAACGGTACCACCC
CATTTATATATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 51 .65 RPM
SRP007412_cerebellum 62 .13 RPM
SRP007412_heart 13 .29 RPM
SRP007412_kidney 81 .66 RPM
SRP007412_liver 27 .17 RPM
SRP007412_testis 67 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014366 possible_ortholog 1 retrogene
retro_amel_77,
Canis familiaris ENSCAFG00000014856 possible_ortholog 1 retrogene
retro_cfam_25,
Equus caballus ENSECAG00000024877 possible_ortholog 1 retrogene
retro_ecab_33,
Homo sapiens ENSG00000063978 ortholog_one2one 1 retrogene
retro_hsap_319,
Loxodonta africana ENSLAFG00000007382 possible_ortholog 1 retrogene
retro_lafr_44,
Microcebus murinus ENSMICG00000001767 ortholog_one2one 1 retrogene
retro_mmur_1265,
Mus musculus ENSMUSG00000029110 ortholog_one2one 1 retrogene
retro_mmus_522,
Nomascus leucogenys ENSNLEG00000000160 ortholog_one2one 2 retrogenes
retro_nleu_1713, retro_nleu_37,
Oryctolagus cuniculus ENSOCUG00000004998 ortholog_one2many 2 retrogenes
retro_ocun_1566, retro_ocun_162,
Otolemur garnettii ENSOGAG00000010776 ortholog_one2one 1 retrogene
retro_ogar_2121,
Pongo abelii ENSPPYG00000025865 possible_ortholog 2 retrogenes
retro_pabe_1240, retro_pabe_36,
Pteropus vampyrus ENSPVAG00000017017 ortholog_one2one 1 retrogene
retro_pvam_167,
Ictidomys tridecemlineatus ENSSTOG00000011101 ortholog_one2many 2 retrogenes
retro_itri_1108, retro_itri_171,
Tarsius syrichta ENSTSYG00000011244 ortholog_one2one 1 retrogene
retro_tsyr_1606,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_345 94.74 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ggor_1144 52.46 94.74
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000015149 retrocopies