Parental gene:

PSMB7, ENSGGOG00000012164

Aliases:None
Description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:G3R8Z6]
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:107745030..107806927(-)


>ENSGGOG00000012164
ATGGCGGCTGTGTCGGTGTATGCTCCACCAGTTGGAGGCTTCTCTTTTGATAACTGCCGCAGGAATGCCGTCTTGGAAGC
CGATTTTGCAAAGAGGGGATACAAGCTTCCAAAGGCCCGGAAAACTGGCACGACCATCGCTGGGGTGGTTTATAAGGATG
GCATAGTTCTTGGAGCAGATACAAGAGCAACTGAAGGGATGGTTGTTGCTGACAAGAACTGTTCAAAAATACACTTCATA
TCTCCTAATATTTATTGTTGTGGTGCTGGGACAGCTGCAGACACAGACATGACAACCCAGCTCATTTCTTCCAACCTGGA
GCTCCACTCCCTCTCCACTGGCCGTCTTCCCAGAGTTGTAACAGCCAATCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTAGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCATGGA
TCAACTGATAAGTTGCCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTATTTGAAGATAAGTTTAGGCC
AGAGATGGAGGAGGAGGAAGCCAAGAATCTGGTGAGCGAAGCCATCGCAGCTGGCATCTTCAACGACCTGGGCTCCGGAA
GCAACATTGACCTCTGTGTCATCAGCAAGAACAAGCTGGATTTTCTCCGCCCATACACAGTGCCCAACAAGAAGGGGACC
AGGCTTGGCCGGTACAGGTGTGAGAAAGGGACTACTGCAGTCCTCACTGAGAAAATCACTCCTCTGGAGATTGATGTGCT
GGAAGAAACAGTCCAAACAATGGACACTTCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 128 .04 RPM
SRP007412_cerebellum 70 .33 RPM
SRP007412_heart 71 .23 RPM
SRP007412_kidney 142 .46 RPM
SRP007412_liver 99 .31 RPM
SRP007412_testis 220 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003067 ortholog_one2one 2 retrogenes
retro_btau_1722, retro_btau_983,
Echinops telfairi ENSETEG00000005432 ortholog_one2one 2 retrogenes
retro_etel_2093, retro_etel_231,
Homo sapiens ENSG00000136930 ortholog_one2one 1 retrogene
retro_hsap_1303,
Nomascus leucogenys ENSNLEG00000017268 ortholog_one2one 1 retrogene
retro_nleu_2947,
Otolemur garnettii ENSOGAG00000003513 ortholog_one2one 1 retrogene
retro_ogar_2828,
Pongo abelii ENSPPYG00000019596 ortholog_one2one 1 retrogene
retro_pabe_1092,
Pan troglodytes ENSPTRG00000021354 ortholog_one2one 1 retrogene
retro_ptro_893,
Pteropus vampyrus ENSPVAG00000000204 ortholog_one2one 2 retrogenes
retro_pvam_1271, retro_pvam_866,
Rattus norvegicus ENSRNOG00000011732 ortholog_one2many 3 retrogenes
retro_rnor_1581, retro_rnor_1582, retro_rnor_2469,
Sorex araneus ENSSARG00000009395 ortholog_one2one 1 retrogene
retro_sara_532,
Tupaia belangeri ENSTBEG00000009196 ortholog_one2one 2 retrogenes
retro_tbel_2889, retro_tbel_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1019 69.57 56.68
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Download FASTA sequences of all ENSGGOG00000012164 retrocopies