Parental gene:

BT.56882, ENSBTAG00000003067

Aliases:None
Description:proteasome subunit beta type-7 precursor [Source:RefSeq peptide;Acc:NP_001033616]
Organism:Cow (Bos taurus)
Coordinates:11:95401691..95458914(-)


>ENSBTAG00000003067
ATGGCGGCTGTGTCAGTGTATGAGCGACCAGTTGGAGGTTTCTCTTTCGATAACTGCCGAAGAAATGCTGTCTTGGAAGC
CGATTTTGCAAAAAAAGGGTACAAGCTTCCAACGGCCCGGAAAACTGGGACGACCATCGCAGGTGTGGTCTATAAGGATG
GCATAGTTCTTGGAGCAGATACAAGGGCAACTGAAGGGATGGTTGTTGCAGACAAGAACTGTTCAAAAATACACTTCATA
TCTCCTAACATTTATTGTTGTGGTGCTGGGACAGCAGCGGACACAGACATGACAACCCAGCTTATTTCTTCCAACTTGGA
GCTCCATTCCCTTTCCACTGGCCGCCTTCCCAGAGTTGTGACGGCCAACCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGAGTAGATGTTACTGGACCTCACCTCTACAGCATCTATCCTCATGGA
TCAACTGATAAGTTGCCTTATGTCACCATGGGTTCGGGCTCCTTGGCAGCGATGGCTGTGTTTGAAGATAAATTCAGGCC
AGACATGGAGGAGGAGGAAGCTAAGAAGCTAGTAAGTGAAGCCATAGCAGCCGGGATCTTCAACGACCTGGGGTCTGGAA
GTAACATTGACCTGTGTGTCATCAGCAAGAGCAAGCTGGATTTTCTCCGTCCGTACTCTGTGCCCAATAAGAAGGGGACC
AGGTTTGGCCGGTACAGGTGTGAGAAAGGGACCACTGCCGTCCTCACTGAAAAAGTCACGACCCTGGAAATTGAGGTGCT
GGAAGAAACAGTCCAAACAATGGACACGTCCTGA

Library Parental gene expression (RPM)
ERP005899_liver 29 .49 RPM
ERP005899_muscle 75 .17 RPM
SRP017611_brain 44 .67 RPM
SRP017611_kidney 54 .53 RPM
SRP017611_liver 46 .82 RPM
SRP030211_testis 66 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000005432 ortholog_one2one 2 retrogenes
retro_etel_2093, retro_etel_231,
Homo sapiens ENSG00000136930 ortholog_one2one 1 retrogene
retro_hsap_1303,
Gorilla gorilla ENSGGOG00000012164 ortholog_one2one 1 retrogene
retro_ggor_1019,
Nomascus leucogenys ENSNLEG00000017268 ortholog_one2one 1 retrogene
retro_nleu_2947,
Otolemur garnettii ENSOGAG00000003513 ortholog_one2one 1 retrogene
retro_ogar_2828,
Pongo abelii ENSPPYG00000019596 ortholog_one2one 1 retrogene
retro_pabe_1092,
Pan troglodytes ENSPTRG00000021354 ortholog_one2one 1 retrogene
retro_ptro_893,
Pteropus vampyrus ENSPVAG00000000204 ortholog_one2one 2 retrogenes
retro_pvam_1271, retro_pvam_866,
Rattus norvegicus ENSRNOG00000011732 ortholog_one2many 3 retrogenes
retro_rnor_1581, retro_rnor_1582, retro_rnor_2469,
Sorex araneus ENSSARG00000009395 ortholog_one2one 1 retrogene
retro_sara_532,
Tupaia belangeri ENSTBEG00000009196 ortholog_one2one 2 retrogenes
retro_tbel_2889, retro_tbel_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_983 61.07 85.92
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2. retro_btau_1722 62.82 81.95
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Download FASTA sequences of all ENSBTAG00000003067 retrocopies