Parental gene:

RBPJ, ENSGGOG00000004582

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:4:26459767..26572690(+)


>ENSGGOG00000004582
ATGGACCACACGGAGGGCTCGCCCGCGGAGGATCCGCCTGCGCATGCTCCATCGCCTGGGAAATTTGGTGAGCGGCCTCC
ACCTAAACGACTTACTAGGGAAGCTATGCGAAATTATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCATGCAA
AAGTTGCACAGAAGTCATATGGAAATGAAAAAAGGTTTTTTTGCCCACCTCCTTGTGTATATCTTATGGGCAGTGGATGG
AAGAAAAAAAAAGAACAAATGGAACGCGATGGTTGTTCTGAACAAGAGTCTCAACCGTGTGCATTTATTGGGATAGGAAA
TAGTGACCAAGAAATGCAGCAGCTAAACTTGGAAGGAAAGAACTATTGCACAGCCAAAACATTGTATATATCTGACTCAG
ACAAGCGAAAGCACTTCATGTTGTCTGTAAAGATGTTCTATGGCAACAGTGATGACATTGGTGTGTTCCTCAGCAAGCGG
ATAAAAGTCATCTCCAAACCTTCCAAAAAGAAGCAGTCATTGAAAAATGCTGACTTATGCATTGCCTCAGGAACAAAGGT
GGCTCTGTTTAATCGACTACGATCCCAGACAGTTAGTACCAGATACTTGCATGTAGAAGGAGGTAATTTTCATGCCAGTT
CACAGCAGTGGGGAGCCTTTTTTATTCATCTCTTGGATGATGATGAATCAGAAGGAGAAGAATTCACAGTCCGAGATGGC
TACATCCATTATGGACAAACAGTCAAACTTGTGTGCTCAGTTACTGGCATGGCACTCCCAAGATTGATAATTAGGAAAGT
TGATAAGCAGACCGCATTATTGGATGCAGATGATCCTGTGTCACAACTCCATAAATGTGCATTTTACCTTAAGGATACAG
AAAGAATGTATTTGTGCCTTTCTCAAGAAAGAATAATTCAATTTCAGGCCACTCCATGTCCAAAAGAACCAAATAAAGAG
ATGATAAATGATGGCGCTTCCTGGACAATCATTAGCACAGATAAGGCAGAGTATACATTTTATGAGGGAATGGGCCCTGT
CCTTGCCCCAGTCACGCCTGTGCCTGTGGTAGAGAGCCTTCAGTTGAATGGCGGTGGGGACGTAGCAATGCTTGAACTTA
CAGGACAGAATTTCACTCCAAATTTACGAGTGTGGTTTGGGGATGTAGAAGCTGAAACTATGTACAGGTGTGGAGAGAGT
ATGCTCTGTGTCGTCCCAGACATTTCTGCATTCCGAGAAGGTTGGAGATGGGTCCGGCAACCAGTCCAGGTTCCAGTAAC
TTTGGTCCGAAATGATGGAATCATTTATTCCACCAGCCTTACCTTTACCTACACACCAGAACCAGGGCCGCGGCCACATT
GCAGTGCAGCAGGAGCAATCCTTCGAGCCAATTCAAGCCAGGTGCCCCCTAACGAATCAAACACAAACAGCGAGGGAAGT
TACACAAACGCCAGCACAAATTCAACCAGTGTCACATCATCTACAGCCACAGTGGTATCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 25 .46 RPM
SRP007412_cerebellum 26 .67 RPM
SRP007412_heart 9 .60 RPM
SRP007412_kidney 29 .48 RPM
SRP007412_liver 17 .46 RPM
SRP007412_testis 59 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003602 ortholog_one2one 1 retrogene
retro_btau_1507,
Choloepus hoffmanni ENSCHOG00000001582 ortholog_one2one 4 retrogenes
retro_chof_1172, retro_chof_1278, retro_chof_2449, retro_chof_371,
Homo sapiens ENSG00000168214 ortholog_one2one 6 retrogenes
retro_hsap_4169, retro_hsap_4171, retro_hsap_4173, retro_hsap_4174, retro_hsap_4256, retro_hsap_4316,
Mus musculus ENSMUSG00000039191 ortholog_one2one 2 retrogenes
retro_mmus_2348, retro_mmus_2819,
Nomascus leucogenys ENSNLEG00000016895 ortholog_one2one 1 retrogene
retro_nleu_2305,
Oryctolagus cuniculus ENSOCUG00000013449 ortholog_one2one 1 retrogene
retro_ocun_1445,
Pan troglodytes ENSPTRG00000015968 ortholog_one2one 1 retrogene
retro_ptro_2829,
Tursiops truncatus ENSTTRG00000009022 ortholog_one2one 2 retrogenes
retro_ttru_1151, retro_ttru_1593,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2853 85.01 100.00
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Download FASTA sequences of all ENSGGOG00000004582 retrocopies