Parental gene:

MAPK6, ENSGGOG00000004003

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:15:30947587..30969546(+)


>ENSGGOG00000004003
ATGGCAGAGAAATTTGAAAGTCTCATGAACATTCATGGTTTTGATCTGGGTTCTAGGTATATGGACTTAAAACCATTGGG
TTGTGGAGGCAATGGCTTGGTTTTTTCTGCTGTAGACAATGACTGTGACAAAAGAGTAGCCATCAAGAAAATTGTCCTTA
CTGATCCCCAGAGTGTCAAACATGCTCTACGTGAAATCAAAATTATTAGAAGACTTGACCATGATAACATTGTGAAAGTG
TTTGAAATTCTTGGTCCCAGTGGAAGCCAATTAACAGACGATGTGGGCTCTCTTACGGAACTGAACAGTGTTTACATTGT
TCAGGAGTACATGGAGACAGACTTGGCTAATGTGCTGGAGCAGGGCCCTTTACTGGAAGAGCATGCCAGGCTTTTCATGT
ATCAGCTGCTACGGGGGCTCAAGTATATTCACTCTGCAAATGTACTGCACAGAGATCTCAAACCAGCTAATCTTTTCATT
AATACGGAAGACTTGGTGCTGAAGATAGGTGACTTTGGTCTTGCACGGATCATGGATCCTCATTATTCCCATAAGGGTCA
TCTTTCTGAAGGATTGGTTACTAAATGGTACAGATCTCCACGTCTTTTACTTTCTCCTAATAATTATACTAAAGCCATTG
ACATGTGGGCTGCAGGCTGCATCTTTGCTGAAATGCTGACTGGTAAAACCCTTTTTGCAGGTGCACATGAACTTGAACAG
ATGCAGCTGATTTTAGAATCTATTCCTGTTGTACATGAGGAAGATCGTCAGGAGCTTCTCAGCGTAATTCCAGTTTACAT
TAGAAATGACATGACTGAGCCACACAAACCTTTAACTCAACTGCTTCCAGGAATTAGTCGAGAAGCACTGGATTTCCTGG
AACAAATTTTGACATTTAGCCCCATGGATCGGTTAACAGCAGAAGAAGCACTCTCCCATCCTTACATGAGCATATATTCT
TTTCCAATGGATGAGCCAATTTCAAGCCATCCTTTTCATATTGAAGATGAAGTTGATGATATTTTGCTTATGGATGAAAC
TCACAGTCACATTTATAACTGGGAAAGGTATCATGATTGTCAGTTTTCAGAGCATGATTGGCCTGTACATAACAACTTTG
ATATTGATGAAGTTCAGCTTGATCCAAGAGCTCTGTCCGATGTCACTGATGAAGAAGAAGTACAAGTTGATCCCCGAAAA
TATTTGGATGGAGATCGGGAAAAGTATCTGGAGGATCCTGCTTTTGATACCAATTACTCTACTGAGCCTTGTTGGCAATA
CTCAGATCATCATGAAAACAAATATTGTGATCTGGAGTGTAGCCATACTTGTAACTACAAAACGAGGTCATCATCATATT
TAGATAACTTAGTTTGGAGAGAGAGTGAAGTTAACCATTACTATGAACCCAAGCTTATTATAGATCTTTCCAATTGGAAA
GAACAAAGCAAAGAAAAATCTGATAAGAAAGGCAAATCAAAATGTGAAAGGAATGGATTGGTTAAAGCCCAGATAGCGCT
AGAGGAAGCATCACAGCAACTGGCTGGAAAAGAAAGGGAAAAGAATCAGGGATTTGATTTTGATTCCTTTATTGCAGGAA
CTATTCAGCTTAGTTCCCAGCATGAGCCTACTGATGTTGTTGATAAATTAAATGACTTGAATAGCTCAGTGTCCCAACTA
GAATTGAAAAGTTTGATATCAAAGTCAGTAAGCCAAGAAAAACAGGAAAAAGGAATGGCAAATCTAGCTCAATTAGAAGC
CTTGTACCAGTCTTCTTGGGACAGCCAGTTTGTGAGTGGTGGGGAGGACTGTTTTTTCATAAATCAGTTTTGTGAGGTAA
GGAAGGATGAACACGTTGAGAAGGAAAACACTTACACTAGTTACTTGGACAAGTTCTTTAGCAGGAAAGAAGATAGTGAA
ATGCTAGAAACTGAGCCAGTAGAGGATGGGAAGCTTGGGGAGAGAGGACATGAGGAAGGATTTCTGAACAACAGTGGGGA
GTTCCTCTTTAACAAGCAGCTCGAGTCCATAGGCATCCCGCAGTTTCACAGTCCAGTTGGGTCACCACTTAAGTCAATAC
AGGCCACATTAACACCTTCTGCTATGAAATCTTCCCCTCAAATTCCTCATCAAACATACAGCAGCATTCTGAAACATCTG
AACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 53 .47 RPM
SRP007412_cerebellum 52 .36 RPM
SRP007412_heart 4 .38 RPM
SRP007412_kidney 30 .26 RPM
SRP007412_liver 34 .79 RPM
SRP007412_testis 184 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000962 ortholog_one2one 1 retrogene
retro_cjac_2633,
Homo sapiens ENSG00000069956 ortholog_one2one 2 retrogenes
retro_hsap_1257, retro_hsap_2519,
Monodelphis domestica ENSMODG00000001962 possible_ortholog 2 retrogenes
retro_mdom_138, retro_mdom_63,
Nomascus leucogenys ENSNLEG00000006476 ortholog_one2one 2 retrogenes
retro_nleu_1441, retro_nleu_2095,
Otolemur garnettii ENSOGAG00000030786 ortholog_one2one 1 retrogene
retro_ogar_1827,
Pongo abelii ENSPPYG00000006482 ortholog_one2one 2 retrogenes
retro_pabe_1853, retro_pabe_3322,
Pan troglodytes ENSPTRG00000020224 ortholog_one2one 3 retrogenes
retro_ptro_1464, retro_ptro_2743, retro_ptro_3045,
Sarcophilus harrisii ENSSHAG00000017091 possible_ortholog 1 retrogene
retro_shar_445,
Tupaia belangeri ENSTBEG00000007876 ortholog_one2one 2 retrogenes
retro_tbel_1879, retro_tbel_2946,
Tursiops truncatus ENSTTRG00000016253 ortholog_one2one 2 retrogenes
retro_ttru_322, retro_ttru_75,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1571 82.35 51.73
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Download FASTA sequences of all ENSGGOG00000004003 retrocopies