Parental gene:

HSPA5, ENSGALG00000001000

Aliases:HSPA5, GRP78
Description:78 kDa glucose-regulated protein [Source:UniProtKB/Swiss-Prot;Acc:Q90593]
Organism:Chicken (Gallus gallus)
Coordinates:17:9591906..9595959(-)


>ENSGALG00000001000
ATGAGGCACCTCCTGTTGGCGCTGCTGCTGCTGGGCGGCGCGCGGGCGGACGATGAGGAGAAAAAGGAGGACGTGGGCAC
GGTGGTGGGCATCGACCTCGGTACCACCTATTCTTGTGTGGGTGTATTCAAGAACGGCCGCGTGGAAATCATTGCCAATG
ACCAGGGGAACCGCATCACGCCATCCTACGTGGCGTTCACGCCTGAGGGGGAGCGCCTGATTGGGGATGCAGCCAAGAAC
CAGCTGACATCCAACCCTGAGAACACTGTGTTTGATGCCAAGCGGCTCATAGGCCGCACCTGGAATGACCCCTCTGTACA
GCAGGACATCAAGTATCTGCCCTTCAAGGTTGTTGAAAAGAAGGCCAAGCCACATATTCAGGTCGATGTTGGTGGTGGAC
AAACAAAAACATTTGCTCCTGAAGAAATTTCTGCCATGGTCCTGACAAAGATGAAAGAAACTGCAGAGGCTTATCTGGGC
AAGAAAGTTACTCATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCCACAAAAGATGCTGGTAC
TATTGCTGGGTTGAACGTGATGCGCATTATTAATGAGCCAACTGCTGCTGCAATTGCATACGGATTGGACAAGAGAGAGG
GTGAAAAGAACATCCTTGTATTTGACCTGGGTGGTGGAACTTTTGATGTCTCCCTCCTGACAATTGACAACGGAGTCTTT
GAAGTTGTGGCTACAAATGGTGACACACACCTGGGTGGAGAAGACTTTGACCAGCGTGTTATGGAGCACTTCATCAAACT
CTACAAGAAGAAAACAGGAAAAGATGTCAGGAAGGATAACAGAGCTGTACAGAAACTAAGACGGGAAGTAGAGAAAGCGA
AGCGGGCCCTGTCATCCCAGCACCAAGCTAGAATTGAAATAGAATCCTTTTTTGAAGGAGAGGATTTCTCTGAGACGCTT
ACTCGTGCCAAATTTGAAGAACTGAATATGGATCTGTTCCGTTCTACGATGAAGCCTGTTCAGAAAGTTCTGGAAGACTC
TGACCTAAAGAAGTCTGATATTGATGAGATTGTTCTTGTTGGTGGTTCTACTCGCATCCCCAAAATACAACAACTTGTTA
AAGAGTTCTTCAATGGGAAAGAGCCTTCTCGTGGCATTAATCCAGATGAGGCTGTAGCCTATGGTGCAGCTGTTCAGGCT
GGTGTTCTCTCTGGGGACCAAGACACAGGTGACCTGGTGTTGCTTGATGTGTGTCCTCTGACACTTGGCATTGAGACAGT
TGGAGGTGTAATGACTAAACTGATCCCAAGAAATACTGTTGTTCCTACCAAGAAGTCTCAGATCTTTTCCACAGCTTCTG
ACAATCAGCCCACTGTGACCATTAAGGTCTATGAAGGTGAACGTCCCCTCACCAAGGACAATCATCTTCTGGGAACTTTT
GATCTGACTGGAATCCCTCCTGCTCCTCGTGGTGTCCCACAGATTGAAGTTACCTTTGAAATAGATGTGAATGGAATCCT
TCGTGTCACAGCTGAAGACAAAGGCACTGGGAACAAAAACAAGATCACAATTACAAATGATCAGAATCGGCTAACACCAG
AGGAGATTGAGAGGATGGTTAATGATGCTGAGAAGTTTGCTGAGGAAGACAAAAAGCTTAAAGAACGCATTGATGCCCGG
AATGAGCTGGAGAGCTATGCGTATTCTTTGAAGAATCAAATTGGGGACAAAGAGAAGCTGGGTGGCAAGCTGTCATCTGA
AGACAAAGAAACAATAGAAAAGGCAGTAGAGGAAAAGATAGAGTGGCTTGAAAGCCATCAGGATGCAGACATTGAAGACT
TCAAATCAAAGAAGAAGGAGCTGGAGGAAGTTGTTCAACCAATTGTTAGCAAGCTCTATGGAAGTGCAGGCCCCCCTCCC
ACTGGTGAAGAAGAAGCAGCAGAGAAGGATGAGTTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 281 .14 RPM
SRP007412_cerebellum 284 .17 RPM
SRP007412_heart 274 .21 RPM
SRP007412_kidney 728 .79 RPM
SRP007412_liver 1349 .91 RPM
SRP007412_testis 373 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006880 ortholog_one2one 1 retrogene
retro_cjac_2221,
Homo sapiens ENSG00000044574 ortholog_one2one 1 retrogene
retro_hsap_3005,
Gallus gallus ENSGALG00000006512 within_species_paralog 1 retrogene
retro_ggal_8,
Gorilla gorilla ENSGGOG00000026879 ortholog_one2one 1 retrogene
retro_ggor_2082,
Macropus eugenii ENSMEUG00000016702 ortholog_one2one 1 retrogene
retro_meug_522,
Mus musculus ENSMUSG00000026864 ortholog_one2one 1 retrogene
retro_mmus_1299,
Nomascus leucogenys ENSNLEG00000017348 ortholog_one2one 1 retrogene
retro_nleu_751,
Otolemur garnettii ENSOGAG00000006786 ortholog_one2one 1 retrogene
retro_ogar_2901,
Pongo abelii ENSPPYG00000019609 ortholog_one2one 1 retrogene
retro_pabe_2491,
Pan troglodytes ENSPTRG00000000563 ortholog_one2one 1 retrogene
retro_ptro_2033,
Ictidomys tridecemlineatus ENSSTOG00000011243 ortholog_one2one 4 retrogenes
retro_itri_1686, retro_itri_1687, retro_itri_1689, retro_itri_1879,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggal_21 99.45 56.13
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Download FASTA sequences of all ENSGALG00000001000 retrocopies