Parental gene: | TERF1, ENSG00000147601 |
| Aliases: | TERF1, PIN2, TRBF1, TRF, TRF1, hTRF1-AS, t-TRF1 |
| Description: | telomeric repeat binding factor (NIMA-interacting) 1 [Source:HGNC Symbol;Acc:11728] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 8:73921098..73960357(+) |
>ENSG00000147601
ATGGCGGAGGATGTTTCCTCAGCGGCCCCGAGCCCGCGGGGCTGTGCGGATGGTAGGGATGCCGACCCTACTGAGGAGCA
GATGGCAGAAACAGAGAGAAACGACGAGGAGCAGTTCGAATGCCAGGAACTGCTCGAGTGCCAGGTGCAGGTGGGGGCCC
CCGAGGAGGAGGAGGAGGAGGAGGAGGACGCGGGCCTGGTGGCCGAGGCCGAGGCCGTGGCTGCCGGCTGGATGCTCGAT
TTCCTCTGCCTCTCTCTTTGCCGAGCTTTCCGCGACGGCCGCTCCGAGGACTTCCGCAGGACCCGCAACAGCGCAGAGGC
TATTATTCATGGACTATCCAGTCTAACAGCTTGCCAGTTGAGAACGATATACATATGTCAGTTTTTGACAAGAATTGCAG
CAGGAAAAACCCTTGATGCACAGTTTGAAAATGATGAACGAATTACACCCTTGGAATCAGCCCTGATGATTTGGGGTTCA
ATTGAAAAGGAACATGACAAACTTCATGAAGAAATACAGAATTTAATTAAAATTCAGGCTATAGCTGTTTGTATGGAAAA
TGGCAACTTTAAAGAAGCAGAAGAAGTCTTTGAAAGAATATTTGGTGATCCAAATTCTCATATGCCTTTCAAAAGCAAAT
TGCTTATGATAATCTCTCAGAAAGATACATTTCATTCCTTTTTTCAACACTTCAGCTACAACCACATGATGGAGAAAATT
AAGAGTTATGTGAATTATGTGCTAAGTGAAAAATCATCAACCTTTCTAATGAAGGCAGCGGCAAAAGTAGTAGAAAGCAA
AAGGACAAGAACAATAACTTCTCAAGATAAACCTAGTGGTAATGATGTTGAAATGGAAACTGAAGCTAATTTGGATACAA
GAAAAAGTGTTAGTGACAAACAGTCTGCGGTAACTGAATCCTCAGAGGGTACAGTATCCTTATTGAGGTCTCACAAGAAT
CTTTTCTTATCTAAGTTGCAACATGGAACCCAGCAACAAGACCTTAATAAGAAAGAAAGAAGAGTAGGAACTCCTCAAAG
TACAAAAAAGAAAAAAGAAAGCAGAAGAGCCACTGAAAGCAGAATACCTGTTTCAAAGAGTCAGCCGGTAACTCCTGAAA
AACATCGAGCTAGAAAAAGACAGGCATGGCTTTGGGAAGAAGACAAGAATTTGAGATCTGGCGTGAGGAAATATGGAGAG
GGAAACTGGTCTAAAATACTGTTGCATTATAAATTCAACAACCGGACAAGTGTCATGTTAAAAGACAGATGGAGGACCAT
GAAGAAACTAAAACTGATTTCCTCAGACAGCGAAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 22 .20 RPM |
| bodymap2_adrenal | 29 .60 RPM |
| bodymap2_brain | 36 .24 RPM |
| bodymap2_breast | 26 .05 RPM |
| bodymap2_colon | 31 .38 RPM |
| bodymap2_heart | 14 .62 RPM |
| bodymap2_kidney | 31 .31 RPM |
| bodymap2_liver | 13 .39 RPM |
| bodymap2_lung | 15 .98 RPM |
| bodymap2_lymph_node | 25 .09 RPM |
| bodymap2_ovary | 55 .07 RPM |
| bodymap2_prostate | 48 .10 RPM |
| bodymap2_skeletal_muscle | 5 .37 RPM |
| bodymap2_testis | 46 .94 RPM |
| bodymap2_thyroid | 34 .72 RPM |
| bodymap2_white_blood_cells | 31 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002407 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007714 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002793 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000022919 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1166 | 88.76 | 84.96 | Please wait, loading  |
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| 2. | retro_hsap_1917 | 86.39 | 96.42 | Please wait, loading |
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| 3. | retro_hsap_2493 | 87.98 | 87.35 | Please wait, loading |
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| 4. | retro_hsap_3099 | 85.71 | 98.09 | Please wait, loading |
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| 5. | retro_hsap_4324 | 88.25 | 87.35 | Please wait, loading |
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| 6. | retro_hsap_4861 | 90.75 | 98.09 | Please wait, loading |
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Download FASTA sequences of all ENSG00000147601 retrocopies