Parental gene:

PRKRIR, ENSG00000137492

Aliases:PRKRIR, DAP4, P52rIPK, THAP0, THAP12
Description:protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:HGNC Symbol;Acc:9440]
Organism:Human (Homo sapiens)
Coordinates:11:76060999..76092015(-)


>ENSG00000137492
ATGCCGAACTTCTGCGCTGCCCCCAACTGCACGCGGAAGAGCACGCAGTCCGACTTGGCCTTCTTCAGGTTCCCGCGGGA
CCCTGCCAGATGCCAGAAGTGGGTGGAGAACTGTAGGAGAGCAGACTTAGAAGATAAAACACCTGATCAGCTAAATAAAC
ATTATCGATTATGTGCCAAACATTTTGAGACCTCTATGATCTGTAGAACTAGTCCTTATAGGACAGTTCTTCGAGATAAT
GCAATACCAACAATATTTGATCTTACCAGTCATTTGAACAACCCACATAGTAGACACAGAAAACGAATAAAAGAACTGAG
TGAAGATGAAATCAGGACACTGAAACAGAAAAAAATTGATGAAACTTCTGAGCAGGAACAAAAACATAAAGAAACCAACA
ATAGCAATGCTCAGAACCCCAGCGAAGAAGAGGGTGAAGGGCAAGATGAGGACATTTTACCTCTAACCCTTGAAGAGAAG
GAAAACAAAGAATACCTAAAATCTCTATTTGAAATCTTGATTCTGATGGGAAAGCAAAACATACCTCTGGATGGACATGA
GGCTGATGAAATCCCAGAAGGTCTCTTTACTCCAGATAACTTTCAGGCACTGCTGGAGTGTCGGATAAATTCTGGTGAAG
AGGTTCTGAGAAAGCGGTTTGAGACAACAGCAGTTAACACGTTGTTTTGTTCAAAAACACAGCAGAGGCAGATGCTAGAG
ATCTGTGAGAGCTGTATTCGAGAAGAAACTCTCAGGGAAGTGAGAGACTCACACTTCTTTTCCATTATCACTGACGATGT
AGTGGACATAGCAGGGGAAGAGCACCTACCTGTGTTGGTGAGGTTTGTTGATGAATCTCATAACCTAAGAGAGGAATTTA
TAGGCTTCCTGCCTTATGAAGCCGATGCAGAAATTTTGGCTGTGAAATTTCACACTATGATAACTGAGAAGTGGGGATTA
AATATGGAGTATTGTCGTGGCCAGGCTTACATTGTCTCTAGTGGATTTTCTTCCAAAATGAAAGTTGTTGCTTCTAGACT
TTTAGAGAAATATCCCCAAGCTATCTACACACTCTGCTCTTCCTGTGCCTTAAATATGTGGTTGGCAAAATCAGTACCTG
TTATGGGAGTATCTGTTGCATTAGGAACAATTGAGGAAGTTTGTTCTTTTTTCCATCGATCACCACAACTGCTTTTAGAA
CTTGACAACGTAATTTCTGTTCTTTTTCAGAACAGTAAAGAAAGGGGTAAAGAACTGAAGGAAATCTGCCATTCTCAGTG
GACAGGCAGGCATGATGCTTTTGAAATTTTAGTGGAACTCCTGCAAGCACTTGTTTTATGTTTAGATGGTATAAATAGTG
ACACAAATATTAGATGGAATAACTATATAGCTGGCCGAGCATTTGTACTCTGCAGTGCAGTGTCAGATTTTGATTTCATT
GTTACTATTGTTGTTCTTAAAAATGTCCTATCTTTTACAAGAGCCTTTGGGAAAAACCTCCAGGGGCAAACCTCTGATGT
CTTCTTTGCGGCCGGTAGCTTGACTGCAGTACTGCATTCACTCAACGAAGTGATGGAAAATATTGAAGTTTATCATGAAT
TTTGGTTTGAGGAAGCCACAAATTTGGCAACCAAACTTGATATTCAAATGAAACTCCCTGGGAAATTCCGCAGAGCTCAC
CAGGGTAACTTGGAATCTCAGCTAACCTCTGAGAGTTACTATAAAGAAACCCTAAGTGTCCCAACAGTGGAGCACATTAT
TCAGGAACTTAAAGATATATTCTCAGAACAGCACCTCAAAGCTCTTAAATGCTTATCTCTGGTACCCTCAGTCATGGGAC
AACTCAAATTCAATACGTCGGAGGAACACCATGCTGACATGTATAGAAGTGACTTACCCAATCCTGACACGCTGTCAGCT
GAGCTTCATTGTTGGAGAATCAAATGGAAACACAGGGGGAAAGATATAGAGCTTCCGTCCACCATCTATGAAGCCCTCCA
CCTGCCTGACATCAAGTTTTTTCCTAATGTGTATGCATTGCTGAAGGTCCTGTGTATTCTTCCTGTGATGAAGGTTGAGA
ATGAGCGGTATGAAAATGGACGAAAGCGTCTTAAAGCATATTTGAGGAACACTTTGACAGACCAAAGGTCAAGTAACTTG
GCTTTGCTTAACATAAATTTTGATATAAAACACGACCTGGATTTAATGGTGGACACATATATTAAACTCTATACAAGTAA
GTCAGAGCTTCCTACAGATAATTCCGAAACTGTGGAAAATACCTAA

Library Parental gene expression (RPM)
bodymap2_adipose 37 .15 RPM
bodymap2_adrenal 51 .36 RPM
bodymap2_brain 27 .00 RPM
bodymap2_breast 48 .33 RPM
bodymap2_colon 32 .23 RPM
bodymap2_heart 22 .21 RPM
bodymap2_kidney 36 .60 RPM
bodymap2_liver 13 .52 RPM
bodymap2_lung 31 .08 RPM
bodymap2_lymph_node 39 .25 RPM
bodymap2_ovary 66 .87 RPM
bodymap2_prostate 37 .50 RPM
bodymap2_skeletal_muscle 19 .81 RPM
bodymap2_testis 46 .15 RPM
bodymap2_thyroid 49 .87 RPM
bodymap2_white_blood_cells 102 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000024488 possible_ortholog 1 retrogene
retro_acar_167,
Bos taurus ENSBTAG00000031609 ortholog_one2one 2 retrogenes
retro_btau_1797, retro_btau_780,
Canis familiaris ENSCAFG00000005274 ortholog_one2one 1 retrogene
retro_cfam_663,
Equus caballus ENSECAG00000021982 ortholog_one2one 1 retrogene
retro_ecab_150,
Mustela putorius furo ENSMPUG00000008784 ortholog_one2one 1 retrogene
retro_mputfur_1571,
Pan troglodytes ENSPTRG00000004091 ortholog_one2one 1 retrogene
retro_ptro_2766,
Tursiops truncatus ENSTTRG00000013287 ortholog_one2many 1 retrogene
retro_ttru_126,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4080 96.04 99.47
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Download FASTA sequences of all ENSG00000137492 retrocopies