Parental gene: | GRPEL1, ENSG00000109519 |
| Aliases: | None |
| Description: | GrpE-like 1, mitochondrial (E. coli) [Source:HGNC Symbol;Acc:19696] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 4:7060632..7069924(-) |
>ENSG00000109519
ATGGCGGCTCAGTGCGTGAGGTTGGCGCGGCGCAGTCTTCCTGCTTTGGCGTTGTCTCTCAGGCCATCTCCCCGGTTGTT
GTGCACAGCCACGAAACAAAAGAACAGTGGCCAGAACCTGGAAGAGGACATGGGTCAGAGTGAACAGAAGGCAGATCCTC
CTGCTACAGAGAAGACCCTCCTGGAAGAGAAGGTCAAGTTGGAGGAACAGCTGAAGGAGACTGTGGAAAAATATAAACGA
GCTTTGGCAGACACTGAGAACTTACGGCAGAGGAGCCAGAAATTGGTGGAGGAGGCAAAATTATACGGCATTCAAGCCTT
CTGCAAGGACTTGTTGGAGGTGGCAGACGTTCTGGAGAAGGCAACACAGTGTGTTCCAAAAGAAGAAATTAAAGACGATA
ACCCTCACCTGAAGAACCTCTATGAGGGGCTGGTCATGACTGAAGTCCAGATCCAGAAGGTGTTCACAAAGCATGGCTTG
CTCAAGTTGAACCCTGTCGGAGCCAAGTTCGACCCTTATGAACATGAGGCCTTGTTCCACACACCGGTTGAGGGGAAGGA
GCCAGGCACAGTGGCCCTAGTTAGCAAAGTGGGGTACAAGCTGCATGGGCGCACTCTGAGACCCGCCCTGGTGGGGGTGG
TGAAGGAAGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 36 .69 RPM |
| bodymap2_adrenal | 38 .77 RPM |
| bodymap2_brain | 36 .38 RPM |
| bodymap2_breast | 24 .96 RPM |
| bodymap2_colon | 41 .28 RPM |
| bodymap2_heart | 34 .34 RPM |
| bodymap2_kidney | 56 .40 RPM |
| bodymap2_liver | 65 .84 RPM |
| bodymap2_lung | 30 .52 RPM |
| bodymap2_lymph_node | 31 .43 RPM |
| bodymap2_ovary | 40 .15 RPM |
| bodymap2_prostate | 31 .12 RPM |
| bodymap2_skeletal_muscle | 37 .70 RPM |
| bodymap2_testis | 44 .66 RPM |
| bodymap2_thyroid | 31 .98 RPM |
| bodymap2_white_blood_cells | 31 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014364 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000164284 | within_species_paralog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000002590 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002955 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010471 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011822 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000032291 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000011314 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014573 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015894 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007667 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3746 | 61.75 | 82.49 | Please wait, loading  |
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| 2. | retro_hsap_3864 | 68.99 | 58.99 | Please wait, loading |
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| 3. | retro_hsap_3870 | 69.01 | 64.06 | Please wait, loading |
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Download FASTA sequences of all ENSG00000109519 retrocopies