Parental gene:

NECAP1, ENSG00000089818

Aliases:None
Description:NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:24539]
Organism:Human (Homo sapiens)
Coordinates:12:8234806..8250367(+)


>ENSG00000089818
ATGGCGACCGAGTTGGAGTACGAGTCTGTGCTGTGTGTGAAGCCAGACGTCAGCGTCTACCGGATTCCGCCCCGGGCCTC
CAACCGCGGTTACAGGGCCTCTGACTGGAAATTAGACCAGCCTGATTGGACTGGTCGCCTCCGAATCACTTCAAAAGGGA
AGACTGCCTATATCAAACTCGAGGATAAAGTTTCAGGGGAGCTCTTTGCTCAGGCACCAGTAGAACAATATCCTGGTATT
GCTGTGGAGACGGTGACAGATTCTAGCCGCTACTTTGTAATCCGGATCCAGGATGGTACTGGGCGCAGTGCTTTCATTGG
CATTGGCTTCACAGATCGGGGAGATGCCTTCGACTTTAATGTCTCCTTGCAGGATCACTTCAAGTGGGTAAAGCAGGAAT
CTGAGATTTCCAAGGAATCTCAAGAAATGGATGCTCGTCCTAAGTTGGATCTGGGCTTCAAGGAAGGACAAACCATCAAG
TTGTGTATCGGGAACATTACAAACAAGAAAGGAGGTGCTTCTAAGCCCAGGACTGCAAGGGGTGGGGGTCTGAGCTTACT
CCCACCCCCGCCAGGAGGCAAAGTCACTATTCCCCCACCATCCTCCTCAGTTGCCATCAGCAATCATGTCACCCCACCAC
CCATTCCGAAATCTAACCATGGAGGCAGTGATGCAGATATCCTTTTAGATTTGGATTCTCCTGCTCCTGTCACGACACCA
GCACCAACTCCAGTTTCTGTAAGCAATGACTTGTGGGGAGACTTCAGCACTGCCTCCAGCTCTGTTCCAAACCAGGCACC
ACAGCCATCCAACTGGGTCCAGTTCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 19 .08 RPM
bodymap2_adrenal 32 .06 RPM
bodymap2_brain 124 .14 RPM
bodymap2_breast 20 .14 RPM
bodymap2_colon 23 .01 RPM
bodymap2_heart 14 .90 RPM
bodymap2_kidney 36 .40 RPM
bodymap2_liver 20 .07 RPM
bodymap2_lung 25 .07 RPM
bodymap2_lymph_node 39 .76 RPM
bodymap2_ovary 38 .44 RPM
bodymap2_prostate 46 .28 RPM
bodymap2_skeletal_muscle 12 .37 RPM
bodymap2_testis 35 .24 RPM
bodymap2_thyroid 32 .13 RPM
bodymap2_white_blood_cells 42 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016989 ortholog_one2one 1 retrogene
retro_amel_1016,
Canis familiaris ENSCAFG00000013930 ortholog_one2one 1 retrogene
retro_cfam_780,
Choloepus hoffmanni ENSCHOG00000008087 ortholog_one2one 3 retrogenes
retro_chof_1692, retro_chof_1818, retro_chof_1913,
Dasypus novemcinctus ENSDNOG00000014778 ortholog_one2one 2 retrogenes
retro_dnov_613, retro_dnov_986,
Gorilla gorilla ENSGGOG00000010233 ortholog_one2one 1 retrogene
retro_ggor_2585,
Loxodonta africana ENSLAFG00000002979 ortholog_one2one 1 retrogene
retro_lafr_632,
Mustela putorius furo ENSMPUG00000016742 ortholog_one2one 1 retrogene
retro_mputfur_361,
Nomascus leucogenys ENSNLEG00000001743 ortholog_one2one 1 retrogene
retro_nleu_1974,
Otolemur garnettii ENSOGAG00000006358 ortholog_one2one 1 retrogene
retro_ogar_3442,
Pongo abelii ENSPPYG00000004238 ortholog_one2one 1 retrogene
retro_pabe_3059,
Pan troglodytes ENSPTRG00000023277 ortholog_one2one 1 retrogene
retro_ptro_2615,
Rattus norvegicus ENSRNOG00000009236 ortholog_one2one 1 retrogene
retro_rnor_1806,
Ictidomys tridecemlineatus ENSSTOG00000010153 ortholog_one2one 2 retrogenes
retro_itri_1107, retro_itri_740,
Tursiops truncatus ENSTTRG00000014260 ortholog_one2one 1 retrogene
retro_ttru_1035,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3839 84.84 100.00
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Download FASTA sequences of all ENSG00000089818 retrocopies