Parental gene:

ENSFCAG00000026474

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:E1:1352338..1356101(+)


>ENSFCAG00000026474
TGTGTCTTACGGACTCTTACCGTAGGAGACAAAGCTTTCGTCGAGTTCCTGAACGATGAGATTAAGGAGGAGAAGAAGAT
CCAGAAGCACGGGTCCCTCCCCAAGATGTCTGGGGGCTGGGAGCTGGAAGTGAACGGGACCGAAGCCACGTTAGTGCGGA
AAGTGGCTGGAGAAAAGATCACGGTGACGTTCAACATTAACAACAGCATCCCACCAACGTTTGCTGGGGAGGAGGAGCCC
TCCCAGGGGCAGAAGGCGGAAGAACAGGAGCCCGAACTGACGTCCACTCCCAATTTCGTGGTGGAGGTTATAAAGAACGG
CGGCAAGAAGGCCCTGGTTCTGGACTGTCACTATCCGGAAGACGAGGTGGGGCAGGAAGAGGAGGACGAGAGTGACATCT
TCGCCATCAGAGAAGTGAGCTTTCAGTCGGTTGGCGAGTCTGAGTGGAAGGACACGAACTACACGCTCAACACGGACTCC
CTGGACTGGGCCTTATACGACCACCTGATGGACTTCCTGGCCGACCGGGGGGTGGACAACACTTTCGCCGATGAGCTGGT
GGAGCTCAGCACGGCCCTGGAGCACCGGGAGTACATCACTTTTCTCGAAGACCTGAAGGGGTTCGTCAAGAGCCAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 29 .04 RPM
SRP017611_kidney 50 .40 RPM
SRP017611_liver 34 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006043 ortholog_one2one 2 retrogenes
retro_amel_1734, retro_amel_356,
Canis familiaris ENSCAFG00000015542 ortholog_one2one 3 retrogenes
retro_cfam_1595, retro_cfam_319, retro_cfam_325,
Callithrix jacchus ENSCJAG00000011352 possible_ortholog 6 retrogenes
retro_cjac_2041, retro_cjac_2408, retro_cjac_4033, retro_cjac_604, retro_cjac_680, retro_cjac_946,
Dasypus novemcinctus ENSDNOG00000008887 possible_ortholog 3 retrogenes
retro_dnov_1151, retro_dnov_1946, retro_dnov_702,
Homo sapiens ENSG00000108561 possible_ortholog 2 retrogenes
retro_hsap_1475, retro_hsap_2516,
Gorilla gorilla ENSGGOG00000002745 possible_ortholog 5 retrogenes
retro_ggor_1133, retro_ggor_1569, retro_ggor_3007, retro_ggor_3008, retro_ggor_717,
Macropus eugenii ENSMEUG00000014882 ortholog_one2many 13 retrogenes
retro_meug_1068, retro_meug_1347, retro_meug_1363, retro_meug_1446, retro_meug_1901, retro_meug_1940, retro_meug_1970, retro_meug_2069, retro_meug_2128, retro_meug_434, retro_meug_580, retro_meug_988, retro_meug_989,
Macaca mulatta ENSMMUG00000006592 possible_ortholog 1 retrogene
retro_mmul_1554,
Mustela putorius furo ENSMPUG00000011246 ortholog_one2one 1 retrogene
retro_mputfur_1213,
Nomascus leucogenys ENSNLEG00000009081 possible_ortholog 2 retrogenes
retro_nleu_2379, retro_nleu_3038,
Otolemur garnettii ENSOGAG00000001610 possible_ortholog 5 retrogenes
retro_ogar_1376, retro_ogar_2502, retro_ogar_2518, retro_ogar_2879, retro_ogar_768,
Ochotona princeps ENSOPRG00000013150 ortholog_one2many 1 retrogene
retro_opri_408,
Pongo abelii ENSPPYG00000007870 possible_ortholog 6 retrogenes
retro_pabe_1222, retro_pabe_1385, retro_pabe_1413, retro_pabe_1866, retro_pabe_1868, retro_pabe_670,
Pan troglodytes ENSPTRG00000008631 possible_ortholog 3 retrogenes
retro_ptro_1140, retro_ptro_1461, retro_ptro_998,
Pteropus vampyrus ENSPVAG00000002466 possible_ortholog 1 retrogene
retro_pvam_384,
Sarcophilus harrisii ENSSHAG00000002441 ortholog_one2many 2 retrogenes
retro_shar_620, retro_shar_813,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_892 68.60 56.60
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2. retro_fcat_1135 72.96 73.11
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3. retro_fcat_1763 68.10 95.28
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Download FASTA sequences of all ENSFCAG00000026474 retrocopies