Parental gene:

ZFAND6, ENSFCAG00000012931

Aliases:None
Description:zinc finger, AN1-type domain 6 [Source:HGNC Symbol;Acc:30164]
Organism:Cat (Felis catus)
Coordinates:B3:1485575..1500157(+)


>ENSFCAG00000012931
ATGTGTATTTTGCCCCAGTTAAGTAAGTTGTACCTTCATCATTCTCCTCCATCAAAAAGTGTGCAACAGAGAAACATGGC
TCAAGAAACTAATCACAGCCAAGTGCCTATGCTTTGTTCTACTGGCTGCGGATTTTATGGAAACCCTCGCACAAATGGCA
TGTGTTCAGTGTGCTATAAAGAACATCTCCAAAGACAGAATAGTAGTAATGGTAGAATCAGCCCACCTGCGGCTTCTGTT
GGCACCCTGTCCGAGTCTTTCCCGGTCCAGTGCGCGGACGGCAGCGTCCCCGATGCACAGTCACCCCTAGACTCCACGTC
TGCATCCGTGCAGCCCAGCCCTGTATCAAATCAGTCGCTTTTATCCGAATCTGTAGCATCTTCCCAAGTGGACAGTACGT
CTGTGGACAAAGCAATCCCTGACACGGAAGACCTGCAAGCTTCAGTATCAGATACGGCGCAGCAGCCATCTGAAGAGCAA
AGCAAGTCTCTTGAAAAGCCAAAACAGAAAAAGAACCGCTGTTTCATGTGCAGGAAGAAAGTAGGACTTACTGGGTTTGA
ATGCCGGTGTGGACATGTGTACTGTGGTGTACATCGTTACTCAGACGTGCACAATTGCTCGTACAATTACAAAGCTGATG
CCGCGGAGAAAATCAGAAAAGAAAACCCGGTAGTTGTCGGCGAAAAGATCCAGAAG

Library Parental gene expression (RPM)
SRP017611_brain 9 .07 RPM
SRP017611_kidney 17 .00 RPM
SRP017611_liver 7 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012321 ortholog_one2one 1 retrogene
retro_btau_593,
Choloepus hoffmanni ENSCHOG00000009491 ortholog_one2one 2 retrogenes
retro_chof_1516, retro_chof_2072,
Felis catus ENSFCAG00000027317 within_species_paralog 1 retrogene
retro_fcat_641,
Homo sapiens ENSG00000086666 ortholog_one2one 1 retrogene
retro_hsap_4153,
Gorilla gorilla ENSGGOG00000015621 ortholog_one2one 1 retrogene
retro_ggor_2790,
Loxodonta africana ENSLAFG00000006722 ortholog_one2one 1 retrogene
retro_lafr_587,
Monodelphis domestica ENSMODG00000019428 ortholog_one2one 1 retrogene
retro_mdom_685,
Nomascus leucogenys ENSNLEG00000008870 ortholog_one2one 1 retrogene
retro_nleu_1387,
Pan troglodytes ENSPTRG00000007361 ortholog_one2one 2 retrogenes
retro_ptro_1375, retro_ptro_2824,
Rattus norvegicus ENSRNOG00000013506 ortholog_one2one 1 retrogene
retro_rnor_2019,
Sus scrofa ENSSSCG00000001779 ortholog_one2one 2 retrogenes
retro_sscr_1206, retro_sscr_1207,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1024 80.12 73.71
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2. retro_fcat_1998 86.11 91.38
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Download FASTA sequences of all ENSFCAG00000012931 retrocopies