Parental gene:

ENSFCAG00000005760

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:E1:57419362..57426915(-)


>ENSFCAG00000005760
ATGGCGCTCAACAAGAATCACTCGGAGGGCGGCGGAGTGATCGTCAACAACACAGAGAGCATCCTGATGTCTTATGACCA
TGTGGAACTTACATTCAATGATATGAAGAACGTGCCCGACGCCTTCAAAGGGACCAAGAAAGGCACCGTCTACCTTACCC
CTTACCGGGTCGTCTTTCTGTCCAAAGGAAAGGATGCCATGCAGTCCTTCATGATGCCCTTTTATCTGATGAAGGACTGT
GAGATCAAGCAACCTGTGTTTGGTGCGAACTACATCAAGGGAACAGTGAAGGCTGAGGCAGGAGGTGGCTGGGAAGGCTC
TGCACCATACAAGTTGACCTTTACGGCAGGGGGAGCCATCGAGTTTGGACAACGGATGCTACAGGTGGCATCTCAAGCCT
CCCGAGGTGAAGCCCCCAATGGAGCCTATGGGTATTCTTACATGCCCAGCGGGGCCTATGTCTTTCCCCCGCCAGTCGCC
AATGGAATGTACCCCTGCCCTCCTGGCTACCCCTATCCACCGCCCCCACCTGAGTTCTATCCAGGACCCCCCATGATGGA
CGGGGCCATGGGATATGTGCAGCCCCCACCACCGCCCTATCCTGGGCCCATGGAACCTCCTGTCAGCGGCCCTGATGTCC
CCTCTACTCCTGCAGCTGAAGCCAAGGCGGCAGAAGCGGCTGCCAGCGCCTATTACAACCCAGGCAACCCACACAACGTC
TACATGCCCACGACCCAGCCTCCACCACCTCCCTACTACCCCCCGGAAGATAAGAAGACCCAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 178 .47 RPM
SRP017611_kidney 90 .90 RPM
SRP017611_liver 31 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000037619 ortholog_many2many 1 retrogene
retro_cjac_575,
Homo sapiens ENSG00000132471 ortholog_one2many 1 retrogene
retro_hsap_1926,
Gorilla gorilla ENSGGOG00000009241 ortholog_one2many 2 retrogenes
retro_ggor_1404, retro_ggor_698,
Macropus eugenii ENSMEUG00000000070 ortholog_one2many 1 retrogene
retro_meug_579,
Macaca mulatta ENSMMUG00000009381 ortholog_many2many 2 retrogenes
retro_mmul_1062, retro_mmul_854,
Monodelphis domestica ENSMODG00000007725 ortholog_many2many 3 retrogenes
retro_mdom_1410, retro_mdom_1847, retro_mdom_375,
Nomascus leucogenys ENSNLEG00000001625 ortholog_one2many 1 retrogene
retro_nleu_1214,
Ochotona princeps ENSOPRG00000006045 ortholog_one2many 2 retrogenes
retro_opri_301, retro_opri_851,
Pongo abelii ENSPPYG00000008640 ortholog_many2many 3 retrogenes
retro_pabe_693, retro_pabe_75, retro_pabe_913,
Pan troglodytes ENSPTRG00000009660 ortholog_many2many 1 retrogene
retro_ptro_15,
Ictidomys tridecemlineatus ENSSTOG00000021421 ortholog_one2many 2 retrogenes
retro_itri_1585, retro_itri_660,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1454 64.05 58.24
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Download FASTA sequences of all ENSFCAG00000005760 retrocopies