Parental gene:

DESI2, ENSEEUG00000009507

Aliases:None
Description:desumoylating isopeptidase 2 [Source:HGNC Symbol;Acc:24264]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_2977:3235..48983(+)


>ENSEEUG00000009507
GGTGGCCATCCTTACCCCTTTTCTGGAATATCTGATATTTCCCCTGGAAATGCTTCTGAATTGGGAGAAACATTTAAATT
TGAAGCTGTTGTTTTAGGGAGTACTGACTTCCTAGAAGATGATATAGAAAAAATTGTAGAAGAACTGGGAAAAGAATACA
AAGGCAATGCTTATCATTTGATGCATAAAAACTGCAATCACTTTTCTTCAGCTTTATCAGAGATTCTTTGTGGGAAAGAG
ATTCCGCGCTGGATCAATCGCCTGGCCTACTTCAGTTCCTGCATACCCTTTCTCCAGAGTTGCCTCCCGAAGGAGTGGCT
CACTCCGGCAGCCCTGCAGTCCAGTGTCAACCAGGAGCTGCAGGATGAACTGGAGGAAGCCGAGGATGCAGCTGCGTCAG
CCTCTATGGGCAGTGCCGCTGCTGGCTCCCGGCCAGGCCGCCACACCAAACTGTAA

Library Parental gene expression (RPM)
SRP017611_brain 1 .45 RPM
SRP017611_kidney 2 .81 RPM
SRP017611_liver 0 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000016 ortholog_one2one 1 retrogene
retro_chof_2439,
Dasypus novemcinctus ENSDNOG00000003484 ortholog_one2one 3 retrogenes
retro_dnov_1042, retro_dnov_2533, retro_dnov_539,
Homo sapiens ENSG00000121644 ortholog_one2one 1 retrogene
retro_hsap_2071,
Gorilla gorilla ENSGGOG00000009797 ortholog_one2one 1 retrogene
retro_ggor_1493,
Nomascus leucogenys ENSNLEG00000004019 ortholog_one2one 1 retrogene
retro_nleu_2734,
Ochotona princeps ENSOPRG00000015368 ortholog_one2one 2 retrogenes
retro_opri_1007, retro_opri_963,
Pongo abelii ENSPPYG00000000055 ortholog_one2one 1 retrogene
retro_pabe_1685,
Pan troglodytes ENSPTRG00000002180 ortholog_one2one 1 retrogene
retro_ptro_1384,
Sus scrofa ENSSSCG00000010876 ortholog_one2one 1 retrogene
retro_sscr_388,
Drosophila melanogaster FBgn0033551 ortholog_one2many 1 retrogene
retro_dmel_30,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_394 93.46 100.00
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2. retro_eeur_470 81.97 75.50
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Download FASTA sequences of all ENSEEUG00000009507 retrocopies