Parental gene:

EBAG9, ENSECAG00000009719

Aliases:None
Description:estrogen receptor binding site associated, antigen, 9 [Source:HGNC Symbol;Acc:3123]
Organism:Horse (Equus caballus)
Coordinates:9:53953265..53973218(+)


>ENSECAG00000009719
ATGGCTATCACACAGTTTCGGTTATTTAAAGTTTGTACCTGCCTAGCAACAGTATTCTCATTCCTAAAGAGATTAATATG
CAGGTCTGGCAGAGGACGGAAATTAAGTGGAGACCAAATAACTTTGCCAACTACAGTTGATTATTCATCAGTTCCTAAAC
AGACAGATGTTGAAGAGTGGACTTCCTGGGATGAAGATGCACCCACAAGTGTAAAGATTGAAGGAGGGAATGGGAATGTG
GCAACACAACAAAATGCTTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACACCGACTATAAGGAAAACTCAGAA
AATCATTATTAAGAAGAGAGAACCATTAAATTTTGGCATCCCGGATGGTAGCACAGGTTTCTCTAGTAGATTAGCAGCTA
CACAAGATATGCCTTTTATTCATCAGTCTCCTGAATTAGGTGACTTAGACACCTGGCAGGAAAATACCAATGCATGGGAA
GAGGAAGAAGATGCGGCTTGGCAAGCAGAAGAAGTTCTGAGGCAGCAGAAGATAGCAGACAGAGAAAAGAGAGCAGCAGA
ACAGCAAAGGAAGAAAATGGAAAAGGAAGCACAGCGGCTAATGAAGAAGGAACAAAACAAAATTGGTGTGAAACTTTCAT
AA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 24 .03 RPM
SRP021940_cerebellum 18 .54 RPM
SRP021940_embryo 15 .83 RPM
SRP021940_placental_villous 16 .31 RPM
SRP021940_synovial_membrane 8 .48 RPM
SRP021940_testis 25 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006190 ortholog_one2one 1 retrogene
retro_amel_1656,
Choloepus hoffmanni ENSCHOG00000007848 ortholog_one2one 5 retrogenes
retro_chof_1116, retro_chof_1455, retro_chof_1805, retro_chof_2245, retro_chof_751,
Cavia porcellus ENSCPOG00000001059 ortholog_one2one 1 retrogene
retro_cpor_1185,
Dipodomys ordii ENSDORG00000010177 ortholog_one2one 2 retrogenes
retro_dord_418, retro_dord_91,
Felis catus ENSFCAG00000025490 ortholog_one2one 1 retrogene
retro_fcat_777,
Macropus eugenii ENSMEUG00000014115 ortholog_one2one 3 retrogenes
retro_meug_1871, retro_meug_2058, retro_meug_597,
Monodelphis domestica ENSMODG00000004795 ortholog_one2many 2 retrogenes
retro_mdom_261, retro_mdom_665,
Mus musculus ENSMUSG00000022339 ortholog_one2one 1 retrogene
retro_mmus_3501,
Rattus norvegicus ENSRNOG00000004220 ortholog_one2one 2 retrogenes
retro_rnor_2914, retro_rnor_2980,
Sus scrofa ENSSSCG00000006024 ortholog_one2one 1 retrogene
retro_sscr_569,
Ictidomys tridecemlineatus ENSSTOG00000015326 ortholog_one2one 1 retrogene
retro_itri_1119,
Tursiops truncatus ENSTTRG00000001745 ortholog_one2one 2 retrogenes
retro_ttru_496, retro_ttru_672,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_211 56.48 50.23
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2. retro_ecab_232 63.46 95.77
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Download FASTA sequences of all ENSECAG00000009719 retrocopies