Parental gene:

HNRNPH3, ENSECAG00000007190

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:HGNC Symbol;Acc:5043]
Organism:Horse (Equus caballus)
Coordinates:1:56712497..56717833(+)


>ENSECAG00000007190
ATGGATTGGGTTATGAAACATAATGGTCCAAATGACGCTAGTGATGGGACAGTACGACTTCGTGGACTGCCATTTGGTTG
CAGCAAAGAGGAAATAGTTCAGTTCTTTCAAGGGTTGGAAATCGTGCCAAATGGGATAACATTGACGATGGACTACCAGG
GGAGAAGCACAGGGGAGGCCTTCGTGCAGTTTGCTTCAAAGGAGATAGCAGAAAATGCTCTGGGGAAACACAAGGAAAGA
ATAGGGCACAGGTATATTGAGATCTTCAGAAGTAGCAGGAGTGAAATCAAAGGATTTTATGATCCACCAAGAAGATTGCT
GGGCCAGCGACCGGGACCATATGATAGACCAATAGGAGGAAGAGGGGGTTATTATGGAGCTGGGCGTGGAAGTATGTATG
ACAGAATGCGACGAGGAGGTGATGGATATGATGGTGGTTATGGAGGTTTTGATGACTATGGTGGCTATAATAATTATGGC
TATGGAAATGATGGCTTTGATGACAGAATGAGAGATGGAAGAGGTATGGGAGGACATGGCTATGGTGGAGCCGGTGATGC
AAGTTCAGGTTTCCATGGTGGTCATTTTGTACATATGAGAGGATTGCCTTTTCGTGCAACTGAAAATGACATTGCTAATT
TCTTCTCACCACTAAATCCAATACGAGTGCATATTGATATTGGAGCTGATGGCAGAGCAACAGGAGAAGCAGATGTAGAA
TTTGTGACACATGAAGATGCAGTAGCTGCCATGTCTAAAGATAAGAATAACATGCAACATCGATACATTGAACTCTTCTT
GAATTCTACTCCTGGAGGTGGCTCTGGAATGGGAGGTTCTGGAATGGGAGGCTACGGCAGAGATGGAATGGATAATCAAG
GAGGTTATGGCTCTGTTGGAAGAATGGGAATGGGAAACAATTACAGTGGAGGCTATGGTACTCCTGACGGTTTGGGTGGT
TATGGCCGCGGTGGTGGTGGCAGTGGAGGTTACTATGGGCAAGGTGGCATGAGTGGAGGTGGATGGCGTGGGATGTACTA
A

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 24 .79 RPM
SRP021940_cerebellum 30 .95 RPM
SRP021940_embryo 131 .06 RPM
SRP021940_placental_villous 60 .48 RPM
SRP021940_synovial_membrane 36 .46 RPM
SRP021940_testis 61 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010365 ortholog_one2one 1 retrogene
retro_acar_184,
Ailuropoda melanoleuca ENSAMEG00000018064 ortholog_one2one 1 retrogene
retro_amel_1375,
Bos taurus ENSBTAG00000014316 ortholog_one2one 2 retrogenes
retro_btau_1504, retro_btau_470,
Callithrix jacchus ENSCJAG00000019154 ortholog_one2many 2 retrogenes
retro_cjac_292, retro_cjac_578,
Equus caballus ENSECAG00000014429 within_species_paralog 1 retrogene
retro_ecab_94,
Gallus gallus ENSGALG00000003947 ortholog_one2one 1 retrogene
retro_ggal_16,
Macropus eugenii ENSMEUG00000013139 ortholog_one2one 1 retrogene
retro_meug_1627,
Mustela putorius furo ENSMPUG00000011997 ortholog_one2one 1 retrogene
retro_mputfur_1469,
Oryctolagus cuniculus ENSOCUG00000004443 ortholog_one2one 3 retrogenes
retro_ocun_1136, retro_ocun_1379, retro_ocun_1615,
Tursiops truncatus ENSTTRG00000013322 ortholog_one2one 2 retrogenes
retro_ttru_1744, retro_ttru_1766,
Vicugna pacos ENSVPAG00000011814 ortholog_one2one 1 retrogene
retro_vpac_403,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_912 87.61 97.40
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Download FASTA sequences of all ENSECAG00000007190 retrocopies