Parental gene:

VAMP7, ENSCPOG00000024405

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_148:114..40575(-)


>ENSCPOG00000024405
ATGGCCATTCTTTTTGCTGTTGTTGCCAGGGGAACCACTATCCTTGCCAAACATGCTTGGTGTGGAGGAAACTTCCTGGA
GGTGACAGAGCAGATTCTGGCTAAGATACCTTCTGAAAATAACAAACTAACATATTCACATGGCAATTATTTGTTTCATT
ACATCTGCGACAGGATTGTATATCTTTGTATCACTGATGATGATTTTGAACGTTCTCGAGCATTCAATTTTCTGAATGAA
GTAAAGAAGAGGTTTCAGACTACTTACGGTTCAAGAGCACAGACAGCACTTCCATATGCCATGAATAGTGAGTTCTCAAG
TGTCTTGGCCGCTCAGCTGAAACATCACTCTGAGAATAAAGGCCTAGACAAAGTAATGGAGACTCAAGCCCAAGTGGATG
AACTGAAAGGAATCATGGTCAGAAATATAGATCTGGTAGCTCAGCGAGGAGAAAGATTGGAATTATTGATAGATAAAACA
GAAAATCTTGTGGATTCATCTGTCACCTTCAAAACAACCAGCAGAAATCTTGCCCGAGCCATGTGTATGAAGAATATCAA
GCTCACCATCATCATCATCATCGTATCAATTGTATTCATCTATATCATTGTATCCTCTCTCTGTGGTGGATTTACATGGC
CAAGCTGTGTAACCAAG

Library Parental gene expression (RPM)
SRP017611_brain 6 .50 RPM
SRP017611_kidney 9 .95 RPM
SRP017611_liver 6 .49 RPM
SRP040447_lung 7 .52 RPM
SRP040447_skeletal_muscle 3 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016289 ortholog_one2one 2 retrogenes
retro_cjac_1958, retro_cjac_2410,
Mus musculus ENSMUSG00000051412 ortholog_one2one 1 retrogene
retro_mmus_2131,
Oryctolagus cuniculus ENSOCUG00000001270 ortholog_one2one 1 retrogene
retro_ocun_842,
Ictidomys tridecemlineatus ENSSTOG00000025036 ortholog_one2one 1 retrogene
retro_itri_720,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_714 67.91 58.90
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Download FASTA sequences of all ENSCPOG00000024405 retrocopies