Parental gene:

COMMD10, ENSCPOG00000020474

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_17:29659485..29680072(+)


>ENSCPOG00000020474
ATGGCGGCGTCCGCGGTGCTGATCTTGCCCAACAGCCCCAGCATGAAAAAAGCAGTGTTGCTGATAAACGCGCTAGATAC
AGGAAGATTTCCAAGGTTGCTTACCCGAATTCTTCAAAAACTTCACCTGAAGGCTGAGAGCAGTTTCAATGAAGATGAAG
AGGAAAAACTTCAAGCTGCATTTTCACTAGAGAAGCAAGAGCTTCACCTAGTTCTTGAAACAATATCATTTATTTTAGAA
CAGGCAGTGTATCACAATGTGAAGCCAGCAGCTTTGCAGCAGCAATTAGAGAATATTCATCTTGAGCAAGACAAAGCAGA
AGCGTTTGTCAATGTTTGGTCTTCAATGGGTCAAGAGACAGTTGAAAAATTCAGGCAGAGGGTTCTGGCTCCCCACAAGA
CAAAGCTGGAGACAGTTGGATGGCAGCTTAACCTTCAAATGGCTCACTCTGCTCAAGCAAAACTAAAATCTCCTCAAGTC
GTGTTACAACTAGGAGTGAACAGTGAAGATTCAAAG

Library Parental gene expression (RPM)
SRP017611_brain 7 .42 RPM
SRP017611_kidney 8 .37 RPM
SRP017611_liver 6 .44 RPM
SRP040447_lung 6 .66 RPM
SRP040447_skeletal_muscle 3 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008311 ortholog_one2one 2 retrogenes
retro_chof_1462, retro_chof_1585,
Loxodonta africana ENSLAFG00000011885 ortholog_one2one 1 retrogene
retro_lafr_142,
Microcebus murinus ENSMICG00000006173 ortholog_one2one 2 retrogenes
retro_mmur_1132, retro_mmur_607,
Myotis lucifugus ENSMLUG00000010780 ortholog_one2one 1 retrogene
retro_mluc_2087,
Sarcophilus harrisii ENSSHAG00000001698 ortholog_one2one 1 retrogene
retro_shar_261,
Tupaia belangeri ENSTBEG00000004061 ortholog_one2one 1 retrogene
retro_tbel_3381,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_337 59.76 93.02
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Download FASTA sequences of all ENSCPOG00000020474 retrocopies