Parental gene:

ELOF1, ENSCPOG00000020359

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_226:671704..672276(-)


>ENSCPOG00000020359
ATGGGACGCAGGAAGTCGAAACGGAAGCCACCCCCCAAGAAGAAGATGACGGGCACCCTGGAGACCCAGTTTACCTGCCC
TTTCTGTAATCACGAGAAGTCCTGTGATGTGAAGATGGACCGTGCCCGCAACACCGGAGTCATTTCCTGTACTGTGTGCC
TAGAGGAATTCCAGACGCCTATCACTTATCTCTCAGAACCCGTGGATGTGTACAGCGATTGGATAGACGCCTGCGAGGCA
GCCAATCAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 12 .54 RPM
SRP017611_kidney 13 .50 RPM
SRP017611_liver 7 .97 RPM
SRP040447_lung 9 .51 RPM
SRP040447_skeletal_muscle 6 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000064 ortholog_one2one 1 retrogene
retro_amel_1495,
Felis catus ENSFCAG00000004926 ortholog_one2one 1 retrogene
retro_fcat_699,
Loxodonta africana ENSLAFG00000001534 ortholog_one2one 2 retrogenes
retro_lafr_1217, retro_lafr_771,
Macropus eugenii ENSMEUG00000012101 ortholog_one2one 1 retrogene
retro_meug_2078,
Otolemur garnettii ENSOGAG00000026211 ortholog_one2one 1 retrogene
retro_ogar_2878,
Ictidomys tridecemlineatus ENSSTOG00000003687 ortholog_one2one 1 retrogene
retro_itri_1081,
Tupaia belangeri ENSTBEG00000004812 ortholog_one2one 1 retrogene
retro_tbel_2163,
Tursiops truncatus ENSTTRG00000001807 ortholog_one2one 1 retrogene
retro_ttru_1611,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1091 50.91 66.27
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Download FASTA sequences of all ENSCPOG00000020359 retrocopies