Parental gene: | ENSCPOG00000013476 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_79:6241509..6248136(+) |
>ENSCPOG00000013476
ATGGCGCCATCGCTATGGAAGGGGCTAGTAGGCATCGGCCTCTTCGCCCTAGCACACGCCGCCTTTTCCGCTGCGCAGCA
TCGTTCTTATATGCGATTAACAGAAAAAGAAGATGAATCGCTGCCAATAGATATAGTTCTTCAGACACTTCTGGCCTTTG
CAGTTACCTGTTATGGTATAGTCCATATTGCAGGGGAGTTTAAAGACATGGATGCCACTTCAGAACTGAAGAATAAGACA
TTTGACACCTTAAGGAATCATCCGTCCTTTTATGTATTTAATCATCGTGGTCGTGTACTGTTCCGGCCTTCAGATACAAC
AAATTCTTCAAACCAAGATGCATTGTCTTCTAACACATCACTGAAGTTACGAAAGCTCGATTCACTGCGCCGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 4 .89 RPM |
| SRP017611_kidney | 4 .71 RPM |
| SRP017611_liver | 6 .40 RPM |
| SRP040447_lung | 5 .02 RPM |
| SRP040447_skeletal_muscle | 4 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000025297 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000005810 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000028393 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000061273 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000029505 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003462 | ortholog_many2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000881 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025854 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004796 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011209 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_104 | 87.60 | 98.47 | Please wait, loading  |
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| 2. | retro_cpor_979 | 77.10 | 99.24 | Please wait, loading |
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| 3. | retro_cpor_1171 | 55.21 | 72.52 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000013476 retrocopies