Parental gene:

TRA2B, ENSCPOG00000006313

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_7:50964852..50972233(-)


>ENSCPOG00000006313
CTTACCCTGCTCCAGAAAGGTGGAAGAAAGAACAAGGAATCCCGTTCTGCTTCCAGAAGTGGAAGTGCTCACGGATCGGG
GAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGATTCCAGACGTTCCAGATCCAAGTCCAGGTCCAGAT
CTGAATCTAGGTCTAGATCCAGAAGAAGTTCTCGAAGGCATTACACAAGGTCGCGGTCTCGATCTCGCTCTCATAGACGT
TCCCGTAGCAGATCGTACAGTCGAGACTATCGCAGACGTCACAGCCATAGCCATTCTCCCATGTCTACTCGAAGGCGTCA
TGTTGGAAATCGGGCAAATCCTGATCCAAACTGTTGCCTTGGAGTGTTTGGATTGAGCTTGTACACCACAGAAAGAGATT
TAAGAGAAGTGTTCTCTAAATATGGCCCAATTGCCGATGTGTCTATTGTATATGACCAGCAGTCTAGGCGTTCAAGAGGA
TTTGCCTTTGTATATTTTGAAAATGTAGATGATGCCAAGGAAGCTAAAGAGCGTGCCAATGGAATGGAACTTGATGGGCG
TAGGATCAGAGTTGATTTCTCTATAACAAAAAGACCACATACCCCAACACCAGGAATTTACATGGGGAGACCTACCTATG
GCAGTTCACGCCGTCGTGACTATTATGACAGAGGATATGACCGTGGCTATGATGATCGGGACTACTACAGCAGATCATAT
AGATACAGAAGACGGTCACCTTCTCCTTATTACAGTCGTGGAGGATACAGGTCACGCTCTAGATCTCGATCCTATTCACC
TCGTAAGTTC

Library Parental gene expression (RPM)
SRP017611_brain 28 .30 RPM
SRP017611_kidney 41 .77 RPM
SRP017611_liver 25 .07 RPM
SRP040447_lung 59 .98 RPM
SRP040447_skeletal_muscle 25 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013345 ortholog_one2one 2 retrogenes
retro_cfam_1971, retro_cfam_966,
Cavia porcellus ENSCPOG00000003553 within_species_paralog 1 retrogene
retro_cpor_950,
Cavia porcellus ENSCPOG00000012164 within_species_paralog 1 retrogene
retro_cpor_778,
Rattus norvegicus ENSRNOG00000001783 possible_ortholog 4 retrogenes
retro_rnor_1130, retro_rnor_1915, retro_rnor_2156, retro_rnor_2807,
Tarsius syrichta ENSTSYG00000000388 possible_ortholog 1 retrogene
retro_tsyr_1632,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_162 73.71 85.19
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Download FASTA sequences of all ENSCPOG00000006313 retrocopies