Parental gene:

BLMH, ENSCPOG00000005048

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_32:22351920..22392701(+)


>ENSCPOG00000005048
GGTAGAATTTCTTCTGGTCTCCCAACAGGACTTGATTCTGAGCAGGTATCTGCCGTGATCCAGAAACTGAAATCCGACCC
TCAGTTTGTACTTGCCCAGAATGTCGGGACCACCCACGACCTGCTGGACATCTGCCTGAAAAGGGCCACGGTGCAGTGCG
CGCAGCATGTGTTCCAGCACGTTGTGCCTCTGGAAGGCAAGCCAGTCACCAACCAGAAGAGCTCTGGGCGATGCTGGATC
TTTTCTTGTCTGAATGTTATGAGACTTCCATTCATGAAAAAATTAAATATTGAAGAATTTGAGTTTAGTCAGTCTTACCT
CTTTTTCTGGGACAAGGTTGAACGCTGTTATTTCTTCTTGAATGCTTTTGTGGACACAGCCCAGAAAAAAGAGCCCGAGG
ATGGGAGGCTGGTGCAATATTTGCTTATGAACCCTACAAATGATGGTGGGCAGTGGGATATGCTTGTCAACATTGTTGAA
AAATATGGTGTTGTCCCTAAGAAATGCTTCCCTGAATCTCATACAACAGAGGCAAGCAGAAGGATGAACGATATTCTGAA
TCATAAGATGAGAGAATTCTGTATACGACTACGGAACCTGGTACACAGTGGAGCAACCAAAGGAGAAATCTCTGCTACAC
AGGATGTCATGATGGAGGAGATACTCCGAGTGGTGTGCATCTGCTTGGGTAATCCACCAGAGACATTCACCTGGGAGTAT
CGAGACAAAGATAAAAATTATCACAAGATCGGCCCCATAACACCCTTGGAGTTTTACAGGGAACATGTCAAGCCACTCTT
CAATATGGAAGACAAGATTTGTTTCGTGAATGATCCACGGCCCCAGCACAAGTACAATAAACTTTATACTGTAGACTACT
TGAGCAATATGGTTGGAGGGAGAAAAACTCTGTATAACAATCAGCCCATTGACTTCTTGAAAAAGATGGTTGCCGCTTCC
ATCAAAGATGGAGAGGCTGTGTGGTTTGGCTGTGATGTTGGAAAGCACTTCAATGGCAAGTTGGGCCTCAGTGACATGAA
CATCTATGACCATGAGTTGGTGTTTGGTGTCTCTTTGAAGAACATGAATAAAGCCGAGAGGTTGTCTTTTGGTGAGTCAC
TGATGACCCACGCCATGACCTTCACTGCTTTCTCGGAGAAGGATGATCAGGATGGGACATTTCTGAAATGGAGAGTAGAG
AATTCATGGGGTGAAGACCACGGACACAAAGGTTACCTGTGCATGACTGACGAGTGGTTCACGCAGTACGTCTACGAGGT
GGTGGTGGACAAGAAGTATGTGCCCGAAGAGGTGCTGGCTGTGTTAGAGCAGGAGCCCATTGTCCTCCCGGCATGGGACC
CCATGGGGGCTCTGGCTGAG

Library Parental gene expression (RPM)
SRP017611_brain 22 .66 RPM
SRP017611_kidney 30 .36 RPM
SRP017611_liver 33 .78 RPM
SRP040447_lung 35 .28 RPM
SRP040447_skeletal_muscle 45 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021370 ortholog_one2one 1 retrogene
retro_btau_1510,
Callithrix jacchus ENSCJAG00000013781 ortholog_one2one 1 retrogene
retro_cjac_2998,
Macropus eugenii ENSMEUG00000008938 ortholog_one2one 1 retrogene
retro_meug_2120,
Rattus norvegicus ENSRNOG00000003563 ortholog_one2one 1 retrogene
retro_rnor_566,
Tursiops truncatus ENSTTRG00000016341 ortholog_one2one 1 retrogene
retro_ttru_1915,
Vicugna pacos ENSVPAG00000003571 ortholog_one2one 1 retrogene
retro_vpac_74,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_896 62.53 82.39
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Download FASTA sequences of all ENSCPOG00000005048 retrocopies