Parental gene:

RPP14, ENSCPOG00000004281

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_0:56711772..56716846(+)


>ENSCPOG00000004281
ATGCCAGCATCAGCTGCCACATATGAAAGAATAGTTTACAAAAATTTCTCAGAATACCACTACATGAAAGTCTGCCTAGA
ATTTCAGGATCATGGAGTTGGACTGAATGTTGCACAGTTCAAACAGCTACTTGTTTCTGCTCTAAAGGACCTGTTTGGGG
AGGTTGGTGCTGCCTTGCCCTTGGACGTCCTGACCTATGAAGAGAAGACCTTGTCAGCCATCCTGAGAGTGTGTAGCAGT
GGTGTGGTCAAATTGTGGAGCTCTTTGACCCTTCTGGGATCCTATAAAGGCAAAAAATGTGCTTTCAGAGTGATTCAGGT
TTCTCCCTTTCTCCTTGCATTATCTGGTAATAGTAGGGAACTGGTATTGGAT

Library Parental gene expression (RPM)
SRP017611_brain 5 .64 RPM
SRP017611_kidney 10 .68 RPM
SRP017611_liver 8 .62 RPM
SRP040447_lung 6 .20 RPM
SRP040447_skeletal_muscle 7 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019987 ortholog_one2one 1 retrogene
retro_btau_1621,
Dasypus novemcinctus ENSDNOG00000013439 ortholog_one2one 1 retrogene
retro_dnov_762,
Macropus eugenii ENSMEUG00000010883 ortholog_one2one 1 retrogene
retro_meug_838,
Microcebus murinus ENSMICG00000014541 ortholog_one2one 1 retrogene
retro_mmur_142,
Myotis lucifugus ENSMLUG00000007998 ortholog_one2one 1 retrogene
retro_mluc_2291,
Ornithorhynchus anatinus ENSOANG00000022513 ortholog_one2one 1 retrogene
retro_oana_119,
Oryctolagus cuniculus ENSOCUG00000027202 ortholog_one2one 3 retrogenes
retro_ocun_1160, retro_ocun_1359, retro_ocun_1425,
Rattus norvegicus ENSRNOG00000039829 ortholog_one2one 1 retrogene
retro_rnor_1530,
Ictidomys tridecemlineatus ENSSTOG00000015394 ortholog_one2one 1 retrogene
retro_itri_1072,
Tarsius syrichta ENSTSYG00000013343 ortholog_one2one 1 retrogene
retro_tsyr_218,
Vicugna pacos ENSVPAG00000000935 ortholog_one2one 1 retrogene
retro_vpac_202,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_476 65.81 93.55
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2. retro_cpor_566 73.13 52.42
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Download FASTA sequences of all ENSCPOG00000004281 retrocopies