Parental gene:

FAR1, ENSCPOG00000002654

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_67:4398018..4428970(+)


>ENSCPOG00000002654
ATGGTTTCAATCCCAGAATACTACGAAGGGAAGAATGTTCTTCTTACAGGAGCTACTGGTTTTCTAGGAAAGGTACTTCT
GGAAAAGTTGCTGAGATCTTGTCCTAAGGTGAATTCAGTGTATGTTTTGGTAAGGCAGAAAGCTGGACAGACACCCCAAG
AGCGAATGGAAGAAATCCTTAGTAGCAAGCTCTTTGACAGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATTGTA
GCAATCAACAGTGAACTCACTCAACCTAAACTGGCTCTTAGTGAAGAAGATAAAGAGGTCATCGTAGATTCTACTAATAT
TATATTCCATTGTGCAGCTACAGTACGGTTTAATGAAAATTTAAGCAGAGATGCCGTTCAGTTAAATGTGATTGCTACAC
AACAGCTTATTCTCCTTGCGCAACAAATGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAGCATATGCCTACTGCAAT
CGAAAGCATATTGATGAAGTAGTGTACCCACCACCTGTAGATCCCAAGAAGCTGATTGATTCTTTAGAATGGATGGATGA
TGACTTAGTAAATGATATCACACCAAAATTAATAGGAGACAGACCTAATACATACATATACACGAAAGCATTGGCAGAGT
ATGTTGTACAGCAAGAAGGAGCAAAGCTAAATGTGGCAATTGTGAGGCCTTCAATTGTTGGTGCCAGTTGGAAAGAACCT
TTTCCTGGATGGATTGATAACTTTAATGGACCAAGTGGCCTCTTTATTGCGGCAGGGAAAGGAATTCTTCGAACAATGCG
TGCCTCCAATAACGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACACAAGCCTTGCAGCAGCCTGGTATTCTG
GAGTTAATAGACCAAGAAACATCATGGTATATAACTGTACAACAGGCAGCACTAATCCTTTCCATTGGGGTGAAGTTGAA
TACCATGTAATTTCCACTTTCAAGAGGAATCCTCTCGAACAGGCCTTCAGACGGCCCAATGTAAATCTAACCTCCAATCA
CCTTTTATATCATTACTGGATTGCTGTAAGCCATAAGGCCCCAGCATTCCTGTATGATATCTACCTCAGGATGACTGGAA
GAAGCCCAAGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGG
GGTTGGAATACTGATAATGTCACTATGTTAATGAATCAACTAAACCCTGAAGATAAAAAGACCTTCAATATTGATGTACG
ACAGTTACATTGGGCAGAATATATAGAAAACTACTGCATGGGAACTAAGAAATATGTTTTGAATGAAGAAATGTCTGGTC
TTCCTGCAGCTAGAAAGCATTTGAACAAGTTGCGGAACATCCGTTACGGTTTCAATACTATCCTTGTGATCCTGATCTGG
CGCATTTTTATTGCAAGGTCACAAATGGCAAGAAATATCTGGTACTTTGTGGTTAGTCTATGTTACAAGTTTCTGTCATA
CTTCAGAGCATCCAGCACTATGAGATACTGA

Library Parental gene expression (RPM)
SRP017611_brain 33 .36 RPM
SRP017611_kidney 25 .33 RPM
SRP017611_liver 2 .26 RPM
SRP040447_lung 28 .90 RPM
SRP040447_skeletal_muscle 11 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003490 ortholog_one2one 2 retrogenes
retro_chof_1358, retro_chof_1733,
Callithrix jacchus ENSCJAG00000010077 ortholog_one2many 1 retrogene
retro_cjac_545,
Homo sapiens ENSG00000197601 ortholog_one2one 1 retrogene
retro_hsap_1225,
Gorilla gorilla ENSGGOG00000001180 ortholog_one2one 1 retrogene
retro_ggor_958,
Macaca mulatta ENSMMUG00000011990 ortholog_one2one 1 retrogene
retro_mmul_1301,
Nomascus leucogenys ENSNLEG00000017695 ortholog_one2one 1 retrogene
retro_nleu_698,
Oryctolagus cuniculus ENSOCUG00000004336 ortholog_one2one 2 retrogenes
retro_ocun_1056, retro_ocun_790,
Otolemur garnettii ENSOGAG00000005064 ortholog_one2one 2 retrogenes
retro_ogar_1353, retro_ogar_341,
Pongo abelii ENSPPYG00000003470 ortholog_one2one 1 retrogene
retro_pabe_1019,
Pan troglodytes ENSPTRG00000024190 ortholog_one2one 1 retrogene
retro_ptro_840,
Rattus norvegicus ENSRNOG00000013176 ortholog_one2one 1 retrogene
retro_rnor_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_267 95.17 100.00
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Download FASTA sequences of all ENSCPOG00000002654 retrocopies