Parental gene:

SLBP, ENSCPOG00000000031

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_24:30492..45172(-)


>ENSCPOG00000000031
ATGGCCTGCCGGCCGCGAAGTCCGCCTAGTTACGCCAGGACCGACCGCGCGCCCCGCAGCCCGCCATCTTCCGCGCGATG
GAACCTCGGGCGTAAGCGCAGAGCCGACGGGAGGCGCCGGAAACCAGAGGAGGACGAGCACCGCGTCGATCACAGGCCCG
AGAGCTTTACCACTCCTGAAGCCCATAAGACCCGATCTAGATGCTCAGACTGGGCAAGTGCAGTTGAAGAAGATGAAATG
AGGACCAGAGTTAACAAAGAAATTGCCAGGTATAAAAGAAAACTCCTCATAAATGACTTTGGGAGAGAGAGAAAATCTTC
GTCAGGAAGTTCTGACTCAAAGGAGTCTACCTGTGCAGTGCCTGCTGATGTGGAGACGGATGAAAGTGTCCTCATGAGAA
GACAGAAGCAGATCAACTATGGGAAGAACACCATTGCCTATGACCGCTATATTAAAGAAGTTCCTAGACACCTTCGACAA
CCTGGCATCCATCCCAAGACCCCCAATAAATTTAAGAAGTACAGTCGGCGATCCTGGGACCAGCAGATCAAGCTCTGGAA
GGTGGCACTGCACTTTTGGGACCCTCCTGCTGAAGAAGGATGTGATTTGCAAGAAATACACCCTGTGGACCTGGGGGAAA
TGGAAACTGAATTCATAGAAAGCAGCTCTGAGTCCCAGGCGAGTTCGCAGGATAACTCCGATGTTTACGCTGGAACACCC
ACCAAAGTCAGACACATGGACTGCCAAGTAGAAGATGAATTTGATTTGGAAGCTTGTTTGACTGAACCTCTGAAAGACTT
CTCCACCATGAGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 17 .25 RPM
SRP017611_kidney 15 .70 RPM
SRP017611_liver 13 .28 RPM
SRP040447_lung 23 .08 RPM
SRP040447_skeletal_muscle 6 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001328 ortholog_one2one 1 retrogene
retro_btau_1456,
Mus musculus ENSMUSG00000004642 ortholog_one2one 1 retrogene
retro_mmus_1169,
Otolemur garnettii ENSOGAG00000009750 ortholog_one2one 1 retrogene
retro_ogar_1463,
Pteropus vampyrus ENSPVAG00000002807 ortholog_one2one 2 retrogenes
retro_pvam_490, retro_pvam_941,
Rattus norvegicus ENSRNOG00000037162 ortholog_one2one 2 retrogenes
retro_rnor_1864, retro_rnor_2016,
Tarsius syrichta ENSTSYG00000000376 ortholog_one2one 2 retrogenes
retro_tsyr_1595, retro_tsyr_482,
Tursiops truncatus ENSTTRG00000010901 ortholog_one2many 1 retrogene
retro_ttru_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_364 70.00 50.18
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000000031 retrocopies