Parental gene:

ENSCJAG00000019467

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:20297758..20312988(-)


>ENSCJAG00000019467
ATGGCTGCCTGCGCTTTTGCTGGTGCGGTGAAAACGGCTTCAGGAATCCTACGGCCCCTAAATATTTTGGCATCTTCAAC
CTATCGAAATTGTGTCAAGAATGCCTCTCTTATTTCTGCATTGTCCACTGGACGTTTTGGTCACATTCAGACATCAGTTG
TTTCCTCCACTTCCAGACTTATCACATCTGAGAAAAACCTGACATGTGGGCGTACTTCAGTGACCCTTAATAGAGTGGCC
CCCTTGCTTCCAAGTGTCCTGAAGCTACCAGTCAGATCTCTAACATACTTCAGTACACGAAAAGGCAAGAGAAAGACTGT
GAAAGCTGTCATCTACAGGTTTCTTCGACTTCATTGTGGACTTTGGGTGAGAAGAAAGGCTGGTTATAAGAAAAAACTAT
GGAAAAAGGAACCTGTGAGAAAAAAGCGACTGAGGGAATTTGTATTCTGCAATAAAACCCAGAGTAAACTCTTAGATAAA
ATGACGACGTCCTTCTGGAAGAGGCGAAACTGGTATGTCGACGATCCTTATCAGAAGTATCATGATCGAACAAATCTGAA
AGTATAG

Library Parental gene expression (RPM)
SRP051959_colon 7 .37 RPM
SRP051959_heart 15 .91 RPM
SRP051959_kidney 12 .27 RPM
SRP051959_liver 10 .09 RPM
SRP051959_lung 9 .65 RPM
SRP051959_lymph_node 10 .87 RPM
SRP051959_skeletal_muscle 23 .59 RPM
SRP051959_spleen 11 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000008329 ortholog_one2many 1 retrogene
retro_dnov_404,
Homo sapiens ENSG00000132313 ortholog_one2many 4 retrogenes
retro_hsap_3424, retro_hsap_4784, retro_hsap_595, retro_hsap_681,
Gorilla gorilla ENSGGOG00000026769 ortholog_many2many 3 retrogenes
retro_ggor_2315, retro_ggor_2979, retro_ggor_526,
Macropus eugenii ENSMEUG00000004773 ortholog_one2many 1 retrogene
retro_meug_1703,
Mus musculus ENSMUSG00000052962 ortholog_one2many 1 retrogene
retro_mmus_1777,
Nomascus leucogenys ENSNLEG00000002756 ortholog_one2many 4 retrogenes
retro_nleu_1103, retro_nleu_1362, retro_nleu_2217, retro_nleu_781,
Otolemur garnettii ENSOGAG00000004048 ortholog_one2many 1 retrogene
retro_ogar_2600,
Pongo abelii ENSPPYG00000012214 ortholog_one2many 5 retrogenes
retro_pabe_1817, retro_pabe_2837, retro_pabe_3724, retro_pabe_541, retro_pabe_595,
Pan troglodytes ENSPTRG00000012152 ortholog_one2many 4 retrogenes
retro_ptro_2325, retro_ptro_3185, retro_ptro_438, retro_ptro_489,
Rattus norvegicus ENSRNOG00000008546 ortholog_one2many 1 retrogene
retro_rnor_1399,
Tupaia belangeri ENSTBEG00000015366 ortholog_one2many 10 retrogenes
retro_tbel_1143, retro_tbel_146, retro_tbel_2647, retro_tbel_289, retro_tbel_2892, retro_tbel_3789, retro_tbel_3828, retro_tbel_428, retro_tbel_4379, retro_tbel_627,
Tarsius syrichta ENSTSYG00000007713 ortholog_one2many 2 retrogenes
retro_tsyr_1128, retro_tsyr_264,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_203 100.00 100.00
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Download FASTA sequences of all ENSCJAG00000019467 retrocopies