Parental gene:

OTX2, ENSCJAG00000018583

Aliases:None
Description:orthodenticle homeobox 2 [Source:HGNC Symbol;Acc:8522]
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:81645524..81649230(-)


>ENSCJAG00000018583
ATGATGTCTTATCTTAAGCAACCGCCTTATGCAGTCAATGGGCTGAGTCTGACCACTTCGGGTATGGACTTGCTGCACCC
CTCTGTGGGCTACCCGGTTGTTCCCTCCAGGCCCAGGCCTTCCCCTCTGACCTCCAGGGCCTGCTTTAATCCCAAGAAGT
GTGACTTCCTCCAAATTCGGTATGGAGAGCCCCAGATCTTTGAGAGGACTGAAGTGATGGCACCCATACAGAGAGCTCAT
TCAAAAGTTCAGGTATGGTTTAAGAATCGAAGAGCTAAGTGCCGCCAGCAACAACAACAACAGCAGAATGGAGGTCAAAA
CAAAGTGAGACCTGCCAAAAAGAAGACCTCTCCAGCTCGGGAAGTGAGTTCCGAGAGTGGAACAAGTGGCCAATTCACTC
CCCCCTCTAGCACCTCAGTCCCAACCATTGCCAGCAGCAGTGCTCCTGTGTCTATCTGGAGCCCAGCTTCCATCTCCCCA
CTGTCAGATCCCTTGTCCACCTCCTCTTCCTGCATGCAGAGATCCTATCCCATGACCTATACTCAGGCTTCAGGTTATAG
TCAAGGATATGCTGGCTCAACTTCCTACTTTGGGGGCATGGACTGTGGATCTTATTTGACCCCTATGCATCACCAGCTTC
CCGGACCAGGGGCCACACTCAGTCCCATGGGTACCAATGCAGTCACCAGCCATCTCAATCAGTCCCCAGCTTCTCTTTCC
ACCCAGGGATATGGAGCTTCACTTGGGTTTAACTCAACCACCGATTGCTTGTATAAGGACCAAACTGCCTCCTGGAAGCT
TAACTTCCATGCTGACTGCTTGGATTACAAAGATCAGACATCCTCGTGA

Library Parental gene expression (RPM)
SRP051959_colon 0 .00 RPM
SRP051959_heart 0 .00 RPM
SRP051959_kidney 0 .00 RPM
SRP051959_liver 0 .00 RPM
SRP051959_lung 0 .00 RPM
SRP051959_lymph_node 0 .00 RPM
SRP051959_skeletal_muscle 0 .00 RPM
SRP051959_spleen 0 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014741 ortholog_one2one 1 retrogene
retro_btau_687,
Callithrix jacchus ENSCJAG00000009866 other_paralog 1 retrogene
retro_cjac_326,
Callithrix jacchus ENSCJAG00000010981 other_paralog 1 retrogene
retro_cjac_891,
Cavia porcellus ENSCPOG00000003420 ortholog_one2one 1 retrogene
retro_cpor_149,
Sus scrofa ENSSSCG00000005063 ortholog_one2one 1 retrogene
retro_sscr_417,
Tursiops truncatus ENSTTRG00000004650 ortholog_one2one 1 retrogene
retro_ttru_473,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1380 81.05 100.00
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Download FASTA sequences of all ENSCJAG00000018583 retrocopies