Parental gene: | SMAGP, ENSCJAG00000017680 |
| Aliases: | None |
| Description: | small cell adhesion glycoprotein [Source:HGNC Symbol;Acc:26918] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:40084514..40116952(-) |
>ENSCJAG00000017680
ATGACCAGCCTCCTGACCACTCCTTCTCCAAGAGCAGAACTGATGACCACCCCAATTTTACGGCCCACTGAAGCCCTGTC
CCCAGAAGATGGAGCCAGCACAGCACTCATTGCAGTTGTTATCACCGTGGTCTTCCTCATCCTGCTCTCGGTCGTGATCT
TGATCTTCTTTTACCTGTACAAGAACAAAGGCAGCTACGTCACCTATGAACCTACAGAAGGCGAGCCCAGTGCCGTTGTC
CAGATGGAGAGTGACTTGGTTAAGAGCAGAGAGAAGGAGGAATATTTCATCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 12 .87 RPM |
| SRP051959_heart | 0 .19 RPM |
| SRP051959_kidney | 3 .26 RPM |
| SRP051959_liver | 3 .12 RPM |
| SRP051959_lung | 1 .95 RPM |
| SRP051959_lymph_node | 1 .71 RPM |
| SRP051959_skeletal_muscle | 0 .09 RPM |
| SRP051959_spleen | 0 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001983 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000024893 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000053559 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3252 | 88.66 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000017680 retrocopies