Parental gene:

C6orf106, ENSCJAG00000015304

Aliases:None
Description:chromosome 6 open reading frame 106 [Source:HGNC Symbol;Acc:21215]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:35478404..35588864(-)


>ENSCJAG00000015304
ATTGAGGGCATGGACGTGGACCTAGACCCGGAGCTGATGCAGAAGTTCAGCTGCCTGGGCACTACCGACAAGGACGTGCT
CATCTCGGAGTTCCAGCGGCTGCTCGGCTTCCAGCTCAACCCTGCCGGTTGCGCCTTCTTCCTGGACATGACCAACTGGA
ACCTACAAGCAGCAATAGGCGCCTATTATGACTTTGAGAGCCCAAACATCAGTGTGCCCTCTATGTCCTTTGTTGAAGAT
GTCACCATAGGAGAAGGGGAGTCAATACCTCCTGATACTCAGTTTGTAAAAACATGGCGGATCCAGAATTCTGGGGCAGA
GGCCTGGCCTCCAGGGGTTTGTCTTAAATATGTCGGGGGAGACCAGTTTGGACATGTGAACATGGTGATGGTGAGATCGC
TAGAGCCCCAAGAGATTGCAGATGTCAGCGTCCAGATGTGCAGCCCCAGCAGAGCAGGAATGTATCAGGGACAGTGGCGG
ATGTGCACTGCTACAGGACTCTACTATGGAGATGTCATCTGGGTGATTCTCAGTGTGGAGGTGGGTGGACTTTTAGGAGT
AACGCAGCAGCTGTCATCTTTTGAAACGGAGTTCAACACACAGCCGCATCGCAAGGTAGAAGGAAACTTCAACCCATTTG
CCTCTCCCCAAAAGAACCGACAATCAGATGAAAACAACTTAAAAGACCCTGGGGGTTCTGAGTTCGACTCGATCAGCAAA
AACACATGGGCTCCTGCTCCTGACACATGGGCTCCTGCTCCTGACCAAACTGAGCAAGACCAGGATAGACTGTCACAGAA
CTCTGTAAATCTGTCTCCCAGCAGTCACGCAAACAACTTATCAGTAGTGACTTACAGTAAGGGGCTCCATGGGCCTTACC
CCTTCGGCCAGTCTTAA

Library Parental gene expression (RPM)
SRP051959_colon 10 .10 RPM
SRP051959_heart 10 .56 RPM
SRP051959_kidney 13 .11 RPM
SRP051959_liver 22 .16 RPM
SRP051959_lung 14 .30 RPM
SRP051959_lymph_node 10 .62 RPM
SRP051959_skeletal_muscle 13 .41 RPM
SRP051959_spleen 10 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034493 ortholog_one2one 1 retrogene
retro_btau_1343,
Homo sapiens ENSG00000196821 ortholog_one2one 1 retrogene
retro_hsap_2137,
Gorilla gorilla ENSGGOG00000000388 ortholog_one2one 1 retrogene
retro_ggor_1653,
Microcebus murinus ENSMICG00000013442 ortholog_one2one 1 retrogene
retro_mmur_1615,
Macaca mulatta ENSMMUG00000022824 ortholog_one2one 1 retrogene
retro_mmul_2155,
Nomascus leucogenys ENSNLEG00000008387 ortholog_one2one 2 retrogenes
retro_nleu_1933, retro_nleu_2739,
Otolemur garnettii ENSOGAG00000011264 ortholog_one2one 1 retrogene
retro_ogar_3245,
Ochotona princeps ENSOPRG00000009350 ortholog_one2one 1 retrogene
retro_opri_559,
Pongo abelii ENSPPYG00000016519 ortholog_one2one 2 retrogenes
retro_pabe_1265, retro_pabe_1928,
Pan troglodytes ENSPTRG00000018068 ortholog_one2one 1 retrogene
retro_ptro_1564,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2788 69.28 50.34
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Download FASTA sequences of all ENSCJAG00000015304 retrocopies