Parental gene:

ENSCJAG00000006356

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:106808399..106826559(-)


>ENSCJAG00000006356
ATGTCGACCAAGAATTTCCGAGTCAGTGACGGGGACTGGATTTGCCCTGACAAAAAATGTGGAAATGTAAACTTTGCTAG
AAGAACCAGTTGTAATCGATGTGGTCGGGAGAAGACAACTGAGGCCAAGATGATGAAAGCTGGAGGCACTGAAATAGGAA
AGACACTTGCGGAAAAGAGCCGAGGCCTATTTAGTGCTAATGACTGGCAATGTAAAACTTGCAGCAATGTGAATTGGGCC
AGAAGATCAGAGTGTAATATGTGTAATACTCCAAAGTATGCTAAATTAGAAGAAAGAACAGGATATGGTGGTGGTTTTAA
TGAAAGAGAAAATGTTGAATATATAGAAAGAGAAGAATCTGATGGTGAATATGATGAGTTTGGACGCAAAAAGAAAAAAT
ACAGAGGGAAAGCAGTTGGTCCTGCATCAATATTAAAGGAAGTTGAAGATAAAGAATCAGAGGGAGAAGAAGAGGATGAG
GATGAAGATCTTTCTAAATATAAATTAGATGAGGATGAGGATGAAGATGATGCTGATCTTTCAAAATATAATCTTGATGC
CAGTGAAGAAGAAGATAGTAATAAAAAGAAATCTAATAGACGAAGTCGCTCAAAGTCTCGGTCTTCACATTCACGATCTT
CATCACGCTCATCCTCCCCCTCAAGTTCAAGGTCTAGGTCCAGGTCCCGTTCAAGAAGTACTTCCAGTTCGCAGTCAAGA
TCTCGTTCCAGTTCCAGAGAACGTTCGAGATCTCGTGGGTCGAAATCAAGATCCAGCTCCAGGTCCACAGGGGCTCTTCT
TCCCCACGAAAAAGATCTTATTCAAGTTCATCATCTTCTCCTGAGAGGAACAGAAAGAGAAGTCGTTCTAGATCTTCTTC
ATCTGGTGATCGCAAAAAAAGACGAACAAGATCACGGTCACCCGAAAGACGCCACAGGTCATCTTCTGGATCATCCCATT
CTGGTTCCCGTTCAAGTTCAAAAAAGAAATAATGCATTAAAATTTACATCTTAA

Library Parental gene expression (RPM)
SRP051959_colon 39 .65 RPM
SRP051959_heart 60 .48 RPM
SRP051959_kidney 60 .66 RPM
SRP051959_liver 44 .97 RPM
SRP051959_lung 64 .92 RPM
SRP051959_lymph_node 81 .00 RPM
SRP051959_skeletal_muscle 54 .22 RPM
SRP051959_spleen 66 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Macaca mulatta ENSMMUG00000017312 ortholog_one2one 2 retrogenes
retro_mmul_2602, retro_mmul_2618,
Monodelphis domestica ENSMODG00000000504 ortholog_one2many 2 retrogenes
retro_mdom_1975, retro_mdom_443,
Oryctolagus cuniculus ENSOCUG00000004640 possible_ortholog 2 retrogenes
retro_ocun_1170, retro_ocun_776,
Otolemur garnettii ENSOGAG00000000485 possible_ortholog 4 retrogenes
retro_ogar_1274, retro_ogar_1841, retro_ogar_2843, retro_ogar_976,
Pan troglodytes ENSPTRG00000000856 possible_ortholog 1 retrogene
retro_ptro_3251,
Tupaia belangeri ENSTBEG00000002316 ortholog_one2one 3 retrogenes
retro_tbel_122, retro_tbel_3653, retro_tbel_4007,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2350 67.56 85.10
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2. retro_cjac_4199 64.91 66.17
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Download FASTA sequences of all ENSCJAG00000006356 retrocopies