Parental gene:

PSMD14, ENSCJAG00000005572

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:HGNC Symbol;Acc:16889]
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:57515201..57625390(-)


>ENSCJAG00000005572
GTGTTAAATTTGTTGTATAGGGGGAGGGGAACAGCTTCATTAGGTTGTGGCCAAGGGCCACCTACAGATGCTCCTGCAGT
GGACACAGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGTCGTGCTGGAGTTCCAATGG
AAGTTATGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCA
GGAACAGGTGTCAGTGTAGAGGCAGTTGATCCAGTGTTCCAAGCCAAAATGTTGGATATGTTGAAGCAAACAGGAAGGCC
GGAGATGGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGA
GCTTTGAAGCTTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGAT
GCCTTCAGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCAAATCTGGGTCACTTAAA
CAAGCCATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACCATTAACTATCGGAAAAATGAAC
TGGAACAGAAGATGTTGCTAAATTTACATAAGAAGAGTTGGATGGAAGGTTTGACACTGCAGGACTACAGTGAACATTGT
AAACATAATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGAT
GACACCTGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTA
TGACTTCAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTTGTATTTAAATAA

Library Parental gene expression (RPM)
SRP051959_colon 24 .18 RPM
SRP051959_heart 18 .47 RPM
SRP051959_kidney 22 .79 RPM
SRP051959_liver 16 .92 RPM
SRP051959_lung 14 .71 RPM
SRP051959_lymph_node 16 .57 RPM
SRP051959_skeletal_muscle 34 .94 RPM
SRP051959_spleen 19 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002556 ortholog_one2one 1 retrogene
retro_chof_2387,
Gorilla gorilla ENSGGOG00000015747 ortholog_one2one 1 retrogene
retro_ggor_1710,
Mus musculus ENSMUSG00000026914 ortholog_one2one 1 retrogene
retro_mmus_701,
Otolemur garnettii ENSOGAG00000004933 ortholog_one2one 2 retrogenes
retro_ogar_2955, retro_ogar_3213,
Pongo abelii ENSPPYG00000012881 ortholog_one2one 1 retrogene
retro_pabe_2100,
Pan troglodytes ENSPTRG00000012575 ortholog_one2one 1 retrogene
retro_ptro_1636,
Rattus norvegicus ENSRNOG00000004911 ortholog_one2one 1 retrogene
retro_rnor_1271,
Tupaia belangeri ENSTBEG00000014118 ortholog_one2one 1 retrogene
retro_tbel_3917,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1434 97.10 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000005572 retrocopies