Parental gene:

MEAF6, ENSCJAG00000001927

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:71879348..71902104(-)


>ENSCJAG00000001927
ATGGCGATGCACAACAAGGCGGCGCCGCCGCAGATCCCCGACACCCGGCGGGAGCTGGCGGAGCTCGTGAAGCGGAAGCA
GGAGCTGGCGNNAAACACTGGCAACTTGGAGCGACAGATCTATGCTTTTGAGGGAAGCTACTTGGAAGACACTCAGATGT
ATGGCAATATTATTCGTGGCTGGGATCGGTATCTGACCAATCAAAAAAACTCCAATAGCAAAAATGATCGAAGGAACCGG
AAGTTTAAGGAAGCTGAGCGACTCTTCAGCAAATCCTCAGTTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCA
GGACCCGCTCATTGAAAAGAGGGAGCCAGGAAGTGGGACAGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAACG
AACCTAGCCAGGAGGACCCTGAGGATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGCCTGCTTCCTCTACTTCC
TCAGGGAGTCACCACAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGCCCGTCTGGCATGTTTGATTATGACTT
TGAGATTGATCTGAAGTTAAACAAAAAACCACGAGCTGACTATTAG

Library Parental gene expression (RPM)
SRP051959_colon 12 .62 RPM
SRP051959_heart 19 .73 RPM
SRP051959_kidney 17 .04 RPM
SRP051959_liver 9 .36 RPM
SRP051959_lung 22 .30 RPM
SRP051959_lymph_node 24 .73 RPM
SRP051959_skeletal_muscle 19 .61 RPM
SRP051959_spleen 16 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000025988 ortholog_one2one 1 retrogene
retro_cpor_1252,
Erinaceus europaeus ENSEEUG00000013971 ortholog_one2one 3 retrogenes
retro_eeur_362, retro_eeur_469, retro_eeur_654,
Macropus eugenii ENSMEUG00000003403 ortholog_one2one 3 retrogenes
retro_meug_1279, retro_meug_584, retro_meug_727,
Myotis lucifugus ENSMLUG00000017128 ortholog_one2one 2 retrogenes
retro_mluc_436, retro_mluc_960,
Otolemur garnettii ENSOGAG00000006773 ortholog_one2one 1 retrogene
retro_ogar_2339,
Vicugna pacos ENSVPAG00000001916 ortholog_one2one 1 retrogene
retro_vpac_566,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2767 72.96 83.70
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Download FASTA sequences of all ENSCJAG00000001927 retrocopies