Parental gene:

AP1S3, ENSCHOG00000011939

Aliases:None
Description:adaptor-related protein complex 1, sigma 3 subunit [Source:HGNC Symbol;Acc:18971]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_4767:224..10603(-)


>ENSCHOG00000011939
ATACATTTCATCTTGCTCTTCAGTCGCCAGGGGAAGTTACGGCTGCAGAAGTGGTACACCACCCTCCCTGACAAAGAGAG
GAAAAAGGTCACCCGGGAAATCATTCAGATCATTCTCTCTCGTGGTCAGAGGACAAGCAGTTTTGTTGACTGGAAGGAGC
TAAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTGCTGTGCGGTAGAAAATCAGGACAATGAGCTCTTGACACTA
GAGATTGTGCATCGTTATGTGGAGTTACTGGACAAATACTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGA
AAAGGCTTATTTTATCCTTGACGAGTTTATAATAGGTGGAGAAATTCAGGAAACATCCAAGAAATCTGCTGTCAAAGCCA
TTGAAGACTCTGATATGTTACAGGAG

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013301 within_species_paralog 4 retrogenes
retro_chof_2345, retro_chof_2677, retro_chof_393, retro_chof_820,
Callithrix jacchus ENSCJAG00000012352 ortholog_one2one 2 retrogenes
retro_cjac_3187, retro_cjac_3903,
Macropus eugenii ENSMEUG00000016580 ortholog_one2one 11 retrogenes
retro_meug_1074, retro_meug_1342, retro_meug_1488, retro_meug_168, retro_meug_1864, retro_meug_289, retro_meug_318, retro_meug_361, retro_meug_816, retro_meug_909, retro_meug_938,
Microcebus murinus ENSMICG00000014406 ortholog_one2one 1 retrogene
retro_mmur_1492,
Monodelphis domestica ENSMODG00000021198 ortholog_one2one 1 retrogene
retro_mdom_1427,
Mus musculus ENSMUSG00000054702 ortholog_one2one 3 retrogenes
retro_mmus_2202, retro_mmus_2799, retro_mmus_487,
Ochotona princeps ENSOPRG00000013358 ortholog_one2one 1 retrogene
retro_opri_443,
Pan troglodytes ENSPTRG00000012979 ortholog_one2one 1 retrogene
retro_ptro_2258,
Sarcophilus harrisii ENSSHAG00000010973 ortholog_one2one 1 retrogene
retro_shar_695,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_113 73.91 80.99
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2. retro_chof_1230 51.72 80.99
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3. retro_chof_1299 59.29 98.59
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4. retro_chof_1949 65.17 61.97
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5. retro_chof_2099 65.97 100.00
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Download FASTA sequences of all ENSCHOG00000011939 retrocopies