Parental gene:

STK13, ENSCAFG00000023297

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:1:100834114..100837528(-)


>ENSCAFG00000023297
AGTCGCCCGGACACCGTGATGCTGTCGGGCAGCGCTCAGCCCGCAAGCGAAGGCGAGAAGACCCAGGAACAGAGCAAAGG
TCCTTTCAGGCGGCGCCTCACCATCGATGACTTTGAAATCGGGCGCCCTCTTGGCAAGGGAAAATTTGGGAACGTGTACC
TGGCTCGGCTCAAGGAAAGCCACTTCATTGTGGCCCTGAAAGTCCTCTTCAAGTCCCAGATAGAAAAGGAAGGACTGGAG
CACCAGCTGCGCAGGGAAATTGAAATCCAGGCGCATCTACAACACCCCAATATCCTACGCCTGTACAACTATTTCCATGA
TGCACGCCGCGTGTACCTGATTCTGGAATATGCTCCAAGGGGTGAGCTCTATAAGGAGCTGCAAAAGAGCCACACATTAG
ATGAACAGCACACAGCCACGATAATGGAGGAATTGGCAGATGCTCTGACTTACTGCCACGAGAAAAAGGTGATTCACCGG
GATATTAAACCAGAGAACCTACTGCTCGGGTTCAAGGGTGAGGTGAAAATTGCAGACTTTGGCTGGTCTGTGCACACACC
ATCTCTGAGGAGAAAGACAATGTGTGGGACTCTGGACTACTTGCCCCCAGAAATGATTGAGAGGAGAACATACAATGAGA
AGGTTGATCTGTGGTGCATTGGAGTACTTTGCTATGAGCTGTTGGTAGGATATCCACCCTTTGAGAGCCCTTCCCATAAT
GAGACCTACAGACGCATCCTCAAGGTAGACCTACGATTTCCCCCATCATTACCTTTGGGGGCCCAGGACTTAGTCTCCAA
GCTTCTCAGATACCAGCCTTTGGAAAGGCTACCCTTGGCCCAGATCATGGAGCACCCCTGGGTCAGGGCCCACTCGAGGA
GGGTGTTGCCTCCATCTGTTCAAATGGCTTCTTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .55 RPM
SRP017611_brain 1 .03 RPM
SRP017611_kidney 0 .07 RPM
SRP017611_liver 0 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029331 within_species_paralog 3 retrogenes
retro_cfam_1027, retro_cfam_257, retro_cfam_764,
Echinops telfairi ENSETEG00000015413 ortholog_one2many 1 retrogene
retro_etel_1828,
Macropus eugenii ENSMEUG00000014431 ortholog_one2one 2 retrogenes
retro_meug_741, retro_meug_947,
Mus musculus ENSMUSG00000070837 ortholog_one2one 1 retrogene
retro_mmus_2455,
Otolemur garnettii ENSOGAG00000000999 ortholog_one2one 6 retrogenes
retro_ogar_1122, retro_ogar_1159, retro_ogar_1240, retro_ogar_1293, retro_ogar_2384, retro_ogar_923,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1177 95.86 55.59
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Download FASTA sequences of all ENSCAFG00000023297 retrocopies