Parental gene:

TSPAN17, ENSCAFG00000016638

Aliases:None
Description:tetraspanin 17 [Source:HGNC Symbol;Acc:13594]
Organism:Dog (Canis familiaris)
Coordinates:4:36684767..36694522(-)


>ENSCAFG00000016638
ATGCCGGGCAAGCACCAGCACTTCCAGGAACCGGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGCTTCAACATTGT
CTTCTGGGTGCTGGGAGCCCTGTTCCTGGCCATTGGCCTCTGGGCCTGGGGTGAGAAGGGCGTTCTCTCCAACATCTCAG
CGCTGACTGATCTGGGAGGCCTGGACCCCGTGTGGCTGTTTATAGTGGTTGGAGGTGTCATGTCAGTGCTGGGCTTTGCT
GGGTGCATCGGCGCCCTCCGGGAGAACACCTTCCTGCTCAAGTTTTTCTCAGTGTTCCTTGGCCTCATCTTCTTCCTGGA
GCTGGCAACAGGGATCCTGGCCTTTGTATTCAAGGACTGGATTCGAGACCAGCTCAATTTCTTCATCAACAACAACGTCA
AGGCCTATCGGGATGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATATTGGTCTTGCTGCGGAGCCCGAGGG
CCTAATGACTGGAACCTCAATATCTATTTCAACTGCACTGACTTGAACCCAAGCCGGGAGCGCTGCGGGGTGCCCTTCTC
CTGCTGCGTCAGGGACCCTGCGGAAGATGTCCTCAACACCCAGTGTGGCTATGATGTCCGGCTCAGACTGGAGCTGGAGC
AACAGGGCTCCATCCACACGAAAGGCTGTGTGGGCCAGTTTGAGAAGTGGCTGCAGGAAAACCTGATCATCGTGGCTGGG
GTCTTTGTGGGCATCGCTCTCCTCCAGATCTTTGGTATCTGCCTGGCCCAGAATCTTGTGAGTGACATCAAGGCAGTGAA
GGCCAACTGGATCAAACATGATGATGGCTACAAACTACTCAAATAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 29 .40 RPM
SRP017611_brain 103 .53 RPM
SRP017611_kidney 43 .91 RPM
SRP017611_liver 20 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007218 ortholog_one2one 2 retrogenes
retro_amel_1365, retro_amel_979,
Canis familiaris ENSCAFG00000010287 within_species_paralog 1 retrogene
retro_cfam_314,
Callithrix jacchus ENSCJAG00000007278 ortholog_one2one 1 retrogene
retro_cjac_2289,
Equus caballus ENSECAG00000022322 ortholog_one2one 1 retrogene
retro_ecab_554,
Felis catus ENSFCAG00000007803 ortholog_one2many 1 retrogene
retro_fcat_1133,
Mustela putorius furo ENSMPUG00000012505 ortholog_one2one 1 retrogene
retro_mputfur_428,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_704 65.52 59.79
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_1585 66.07 58.72
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000016638 retrocopies