Parental gene:

ENSCAFG00000016482

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:20:48395911..48405914(+)


>ENSCAFG00000016482
ATGGCCAAGGTTTCTGTGCTGAACGTGGCGGTGCTGGAGAATCCGAGCCCTTTCCACAGCCCCTTCCGGTTCGAGATCAG
CTTCGAGTGCAATGAGGCCCTGGCGGACGATCTAGAATGGAAGATCATTTATGTTGGCTCAGCTGAGAGTGAGGAGTTTG
ACCAAATCCTGGACTCTGTGCTAGTTGGCCCTGTCCCAGCAGGGAGGCACATGTTCATCTTTCAGGCTGATGCCCCCAAC
CCATCCCTCATCCCAGAGACTGATGCTGTGGGTGTGACCGTGGTCCTCATCACCTGCACCTACCATGGACAGGAGTTCAT
CCGTGTGGGCTACTACGTCAACAATGAATACCCCAATCCTGAGCTGCGGGAGAACCCACCCCTGAAGCCAGACTTCTCTC
AGCTCCAGAGGAACATCTTGGCCTCAAACCCCCGAGTGACCCGCTTCCACATCAACTGGGACAACATGGACAGACTAGAG
GCCATAGAGAACCAGGACCCCACCCTGGGCTGTGGCCTCCCCTTCAGCTGTGCTCCCATCAAAGGCTTGGGTCTCCCAGG
TTGCATTCCTGGGCTCCTACCCGAGAATTCCATGGACTGCATCTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .76 RPM
SRP017611_brain 0 .08 RPM
SRP017611_kidney 0 .86 RPM
SRP017611_liver 0 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004085 ortholog_one2many 1 retrogene
retro_btau_662,
Echinops telfairi ENSETEG00000013713 ortholog_one2many 1 retrogene
retro_etel_379,
Myotis lucifugus ENSMLUG00000000537 ortholog_one2many 4 retrogenes
retro_mluc_1426, retro_mluc_2042, retro_mluc_2614, retro_mluc_775,
Monodelphis domestica ENSMODG00000012099 ortholog_one2many 4 retrogenes
retro_mdom_366, retro_mdom_367, retro_mdom_369, retro_mdom_688,
Sorex araneus ENSSARG00000000534 ortholog_one2many 1 retrogene
retro_sara_552,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_33 99.00 100.00
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Download FASTA sequences of all ENSCAFG00000016482 retrocopies