Parental gene:

TRAPPC2, ENSCAFG00000011754

Aliases:None
Description:Trafficking protein particle complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:E2QV03]
Organism:Dog (Canis familiaris)
Coordinates:X:10129099..10140351(-)


>ENSCAFG00000011754
ATGCCACCGCCGGACTCTCGCGAGGATCGCTCGGGGAGTTCCGACCCAGGGGGCGCGGCGCGGCGCGGCGCGGGTCGGCC
TTGGGAAGTGTGGCTGTTGCGATTGTCGGATTCTCGCGGCAGGAGCTACATATTGAAGACAATGTCTGGAAGCTTCTACT
TTGTAATTGTTGGCCACCATGATAATCCAGTTTTCGAAATGGAATTTTTGCCAGCTGGAAAAGCAGAATCCAAAGATGAT
CATCGTCATCTGAACCAGTTCATAGCTCATGCTGCTCTCGACCTTGTAGATGAGAATATGTGGCTGTCAAACAACATGTA
CCTGAAAACTGTGGACAAGTTCAACGAGTGGTTTGTTTCGGCATTTGTTACTGCAGGTCATATGAGATTTATTATGCTTC
ATGACATAAGACAAGAAGATGGAATAAAGAACTTTTTTACTGATGTCTATGATTTATACATAAAGTTTGCAATGAATCCA
TTTTATGAACCCAATTCTCCTATTCGATCAAGCGCTTTTGACAGAAAAGTTCAGTTTCTTGGGAAGAAGCACCTTTTAAG
TTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 13 .10 RPM
SRP017611_brain 16 .20 RPM
SRP017611_kidney 13 .87 RPM
SRP017611_liver 4 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001719 ortholog_one2many 1 retrogene
retro_acar_53,
Homo sapiens ENSG00000196459 ortholog_one2many 1 retrogene
retro_hsap_73,
Microcebus murinus ENSMICG00000004690 ortholog_one2one 1 retrogene
retro_mmur_1022,
Macaca mulatta ENSMMUG00000022619 ortholog_one2many 1 retrogene
retro_mmul_326,
Monodelphis domestica ENSMODG00000017312 ortholog_one2one 2 retrogenes
retro_mdom_1737, retro_mdom_1901,
Mus musculus ENSMUSG00000079317 ortholog_one2many 2 retrogenes
retro_mmus_198, retro_mmus_2522,
Otolemur garnettii ENSOGAG00000002870 ortholog_one2many 2 retrogenes
retro_ogar_369, retro_ogar_60,
Pan troglodytes ENSPTRG00000021674 ortholog_one2many 1 retrogene
retro_ptro_72,
Sorex araneus ENSSARG00000006353 ortholog_one2one 1 retrogene
retro_sara_244,
Ictidomys tridecemlineatus ENSSTOG00000025097 ortholog_one2one 1 retrogene
retro_itri_1014,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_368 83.97 69.52
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2. retro_cfam_1608 72.00 52.94
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Download FASTA sequences of all ENSCAFG00000011754 retrocopies