Parental gene:

TMEM147, ENSCAFG00000006960

Aliases:None
Description:transmembrane protein 147 [Source:HGNC Symbol;Acc:30414]
Organism:Dog (Canis familiaris)
Coordinates:1:117119531..117121000(-)


>ENSCAFG00000006960
ATGACCCTGTTCCACTTCGGGAACTGCTTCGCCCTGGCCTACTTCCCGTACTTCATCACCTACAAGTGCAGCGGCCTGTC
GGAGTACAACGCCTTCTGGAAGTGCGTGCAGGCCGGCGTCACCTACCTCTTCGTGCAGCTGTGCAAGATGCTGTTCCTGG
CCACTTTTTTTCCCACCTGGGAAGGCGGCATCTATGACTTCATCGGGGAGTTCATGAAGGCCAGCGTGGATGTGGCGGAC
CTGATCGGCCTCAACCTTGTCATGTCCCGGAACGCAGGCAAGGGGGAGTACAAGATCATGGTTGCTGCCCTGGGCTGGGC
CACCGCCGAGCTCATTATGTCCCGCTGCATCCCTCTCTGGGTTGGAGCCCGGGGCATTGAGTTTGACTGGAAGTACATCC
AGATGAGCATTGACTCCAACATCAGTCTGGTCCATTACATCGTCGCATCTGCCCAGGTCTGGATGATAACACGCTACGAC
CTGTACCACACTTTTCGGCCAGCGGTCCTCCTCCTGATGTTCCTCAGCGTCTACAAGGCCTTTGTCATGGAGACCTTCGT
CCACCTCTGTTCCCTGGGCAGCTGGACAGCACTGCTGGCCCGGGCAGTGGTGACAGGGCTGCTGGCCCTCAGCACCCTGG
CCCTCTACGTAGCCGTCGTCAACGTGCACTCCTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 67 .70 RPM
SRP017611_brain 38 .11 RPM
SRP017611_kidney 129 .10 RPM
SRP017611_liver 23 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010132 ortholog_one2one 1 retrogene
retro_acar_105,
Ailuropoda melanoleuca ENSAMEG00000000375 ortholog_one2one 1 retrogene
retro_amel_1193,
Bos taurus ENSBTAG00000015920 ortholog_one2one 1 retrogene
retro_btau_1546,
Dasypus novemcinctus ENSDNOG00000004059 ortholog_one2one 1 retrogene
retro_dnov_1123,
Felis catus ENSFCAG00000006373 ortholog_one2one 2 retrogenes
retro_fcat_1489, retro_fcat_224,
Myotis lucifugus ENSMLUG00000016383 ortholog_one2one 1 retrogene
retro_mluc_1889,
Mustela putorius furo ENSMPUG00000006709 ortholog_one2one 1 retrogene
retro_mputfur_588,
Tarsius syrichta ENSTSYG00000008207 ortholog_one2one 1 retrogene
retro_tsyr_56,
Tursiops truncatus ENSTTRG00000015114 ortholog_one2one 2 retrogenes
retro_ttru_1406, retro_ttru_219,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1070 66.67 87.95
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2. retro_cfam_1265 73.48 100.00
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Download FASTA sequences of all ENSCAFG00000006960 retrocopies