Parental gene: | ENSCAFG00000000071 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 10:204678..205881(+) |
>ENSCAFG00000000071
ATGAATGTGGGGGTGGCACACAGCGAAGTAAACCCCAACACTCGCGTGATGAATAGCCGGGGCATCTGGCTGGCCTACAT
CATCTTGGTAGGACTGCTGCATGTGGTTCTACTCAGCATCCCCTTCTTCAGCATACCTGTTGTCTGGACCCTGACCAACG
TCATCCATAACTTGGCTATGTATGTCTTCTTACATACAGTGAAAGGGACACCCTTTGAGACCCCTGACCAAGGGAAGGCT
CGGCTACTGACACACTGGGAACAGATGGACTACGGGCTCCAATTTACCTCCTCCCGCAAATTCCTCAGCATCTCTCCTAT
TGTACTCTACCTCCTGGCCAGCTTCTACACCAAGTATGATGCTGCTCACTTCATCATCAACACAGCCTCATTGCTTAGCG
TACTGCTGCCTAAGTTACCCCAATTCCATGGGGTTCGTCTCTTTGGCATCAACAAATACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 5 .46 RPM |
| SRP017611_brain | 3 .10 RPM |
| SRP017611_kidney | 30 .77 RPM |
| SRP017611_liver | 6 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009601 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000015224 | ortholog_many2many | 1 retrogene | |
| Felis catus | ENSFCAG00000013964 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014896 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010920 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003575 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006292 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000911 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000025353 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001695 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_187 | 89.54 | 100.00 | Please wait, loading  |
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| 2. | retro_cfam_335 | 66.02 | 67.32 | Please wait, loading |
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| 3. | retro_cfam_576 | 91.61 | 100.00 | Please wait, loading |
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| 4. | retro_cfam_972 | 83.33 | 81.70 | Please wait, loading |
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| 5. | retro_cfam_1078 | 63.29 | 100.00 | Please wait, loading |
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| 6. | retro_cfam_1248 | 99.23 | 84.97 | Please wait, loading |
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| 7. | retro_cfam_1512 | 85.06 | 100.00 | Please wait, loading |
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| 8. | retro_cfam_1786 | 85.16 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCAFG00000000071 retrocopies