Parental gene:

GPD1L, ENSBTAG00000009826

Aliases:None
Description:glycerol-3-phosphate dehydrogenase 1-like protein [Source:RefSeq peptide;Acc:NP_001093833]
Organism:Cow (Bos taurus)
Coordinates:22:6666780..6728246(+)


>ENSBTAG00000009826
ATGGCAGCGGCGCCCCTGAAAGTGTGCATCGTGGGCTCGGGGAACTGGGGTTCAGCTGTTGCAAAAATAATTGGTAATAA
TGTCAGGAAACTTCAGAAGTTTGCCTCCACGGTCAAGATGTGGGTCTTTGAAGAAACAGTTAATGGGAGAAAACTGACAG
ACATCATAAATAATGACCACGAAAATGTGAAATATCTCCCTGGACACAAGCTGCCAGAAAATGTGGTTGCCGTCGCGAAC
CTCAGCGAGGCCGTGCAGGACGCAGACCTGCTGGTGTTTGTCATCCCCCACCAGTTCATCCACCGGATCTGCGACGAGAT
CACGGGGAGGGTGCCGAAGGATGCTCTGGGCATCACCCTCATCAAGGGCATAGACGAGGGTCCTGAGGGGCTGAAGCTCA
TTTCTGACATCATCCGAGAGAAGATGGGCATTGACATCAGCGTGCTGATGGGAGCTAACATTGCCAACGAGGTGGCCGCC
GGCAAGTTCTGCGAGACCACCATCGGCAGCAAGATAATGGAGAATGGCCTTCTCTTCAAAGAACTTCTGCAGACTCCAAA
TTTTCGAATTACGGTGGTGGATGATGCAGACACGGTTGAACTGTGTGGTGCCCTGAAGAACATCGTGGCCGTAGGCGCCG
GGTTCTGTGACGGCCTCCTCTGTGGCGACAACACGAAAGCCGCCGTCATCCGCCTGGGGCTCATGGAGATGATTGCCTTT
GCCCGGATCTTCTGCAAAGGCCAGGTGTCCACGGCCACGTTCCTGGAGAGCTGCGGCGTGGCCGATCTCATCACCACCTG
CTACGGGGGCCGGAACCGCAAGGTGGCCGAGGCCTTCGCCAGGACTGGCAAGACCATCGAAGAACTGGAGAAGGAGATGC
TGAATGGACAGAAGCTGCAAGGACCTCAGACTTCAGCCGAGGTGTACCGCATCCTCAAACAGAAGGGGCTGCTCGACAAG
TTTCCATTGTTCACTGCAGTGTACCAGATCTGCTATGAAGGCCGGCCCGTTCAAGAGATGTTGTCTTGTCTCCAGAGCCA
TCCAGAGCATATATAG

Library Parental gene expression (RPM)
ERP005899_liver 0 .29 RPM
ERP005899_muscle 34 .84 RPM
SRP017611_brain 8 .72 RPM
SRP017611_kidney 10 .91 RPM
SRP017611_liver 0 .76 RPM
SRP030211_testis 17 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012633 ortholog_one2one 5 retrogenes
retro_chof_1033, retro_chof_306, retro_chof_340, retro_chof_620, retro_chof_724,
Loxodonta africana ENSLAFG00000013996 ortholog_one2many 1 retrogene
retro_lafr_101,
Microcebus murinus ENSMICG00000011060 ortholog_one2one 1 retrogene
retro_mmur_1205,
Mus musculus ENSMUSG00000050627 ortholog_one2one 3 retrogenes
retro_mmus_1348, retro_mmus_2552, retro_mmus_3695,
Oryctolagus cuniculus ENSOCUG00000010093 ortholog_one2one 2 retrogenes
retro_ocun_1529, retro_ocun_1588,
Otolemur garnettii ENSOGAG00000013243 ortholog_one2many 1 retrogene
retro_ogar_285,
Procavia capensis ENSPCAG00000016132 ortholog_one2one 1 retrogene
retro_pcap_316,
Rattus norvegicus ENSRNOG00000026455 ortholog_one2one 2 retrogenes
retro_rnor_2035, retro_rnor_2474,
Sus scrofa ENSSSCG00000021977 ortholog_one2one 1 retrogene
retro_sscr_154,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1671 88.57 99.72
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Download FASTA sequences of all ENSBTAG00000009826 retrocopies