Parental gene:

OTUB1, ENSBTAG00000003967

Aliases:None
Description:ubiquitin thioesterase OTUB1 [Source:RefSeq peptide;Acc:NP_001029891]
Organism:Cow (Bos taurus)
Coordinates:29:42882592..42889928(+)


>ENSBTAG00000003967
ATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTTGGCAGCGACTCCGAAGGTGTTAACTGTCTTGCTTATGA
TGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCAGAACCCACTGGTCTCGGAGCGGCTGGAGC
TCTCTGTCCTATACAAAGAGTATGCTGAGGACGACAACATCTATCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCA
TACATCCGCAAGACCAGGCCTGATGGAAACTGTTTCTATCGCGCTTTCGGATTCTCCCACTTGGAGGCGTTGCTGGACGA
CAGCAAGGAATTGCAGCGGTTCAAGGCTGTGTCTGCCAAGAGCAAAGAGGACCTGGTGTCCCAGGGCTTCACTGAGTTCA
CAATTGAGGATTTCCACAACACGTTCATGGACCTGATCGAGCAGGTGGAGAAGCGGACCCCCGTGGCTGACCTGCTGGCC
TCCTTTAACGACCAGAGCACCTCGGACTACCTGGTGGTCTACCTGCGGCTGCTCACCTCAGGCTATCTGCAGCGCGAGAG
CAAGTTCTTTGAGCACTTCATCGAGGGCGGGCGCACCGTCAAGGAGTTCTGCCAGCAGGAGGTGGAGCCCATGTGCAAGG
AGAGCGACCACATCCACATCATCGCGCTGGCCCAGGCGCTCAGCGTCTCCATCCAGGTGGAGTACATGGACCGCGGCGAG
GGCGGCACCACCAACCCCCACGTCTTCCCCGAGGGCTCCGAGCCCAAGGTCTACCTGCTCTACCGGCCCGGACACTACGA
CATCCTCTACAAGTAG

Library Parental gene expression (RPM)
ERP005899_liver 9 .30 RPM
ERP005899_muscle 54 .95 RPM
SRP017611_brain 53 .86 RPM
SRP017611_kidney 35 .92 RPM
SRP017611_liver 17 .82 RPM
SRP030211_testis 116 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018084 ortholog_one2one 1 retrogene
retro_amel_1270,
Canis familiaris ENSCAFG00000014729 ortholog_one2one 2 retrogenes
retro_cfam_1376, retro_cfam_2023,
Equus caballus ENSECAG00000002621 ortholog_one2one 1 retrogene
retro_ecab_760,
Myotis lucifugus ENSMLUG00000012235 ortholog_one2many 2 retrogenes
retro_mluc_1257, retro_mluc_614,
Mustela putorius furo ENSMPUG00000013314 ortholog_one2one 1 retrogene
retro_mputfur_1057,
Pteropus vampyrus ENSPVAG00000017099 ortholog_one2one 2 retrogenes
retro_pvam_131, retro_pvam_274,
Rattus norvegicus ENSRNOG00000021175 ortholog_one2one 1 retrogene
retro_rnor_2431,
Sarcophilus harrisii ENSSHAG00000004156 ortholog_one2many 1 retrogene
retro_shar_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1119 67.03 67.16
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Download FASTA sequences of all ENSBTAG00000003967 retrocopies